Shewanella woodyi: Swoo_3798
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Entry
Swoo_3798 CDS
T00676
Name
(GenBank) transcriptional regulator, TraR/DksA family
KO
K06204
RNA polymerase-binding transcription factor
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swd03000
]
Swoo_3798
03021 Transcription machinery [BR:
swd03021
]
Swoo_3798
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_3798
Transcription factors [BR:
swd03000
]
Prokaryotic type
Other transcription factors
Others
Swoo_3798
Transcription machinery [BR:
swd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
Swoo_3798
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA transcription factors
Swoo_3798
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
DZR
MG491_central
Motif
Other DBs
NCBI-ProteinID:
ACA88057
UniProt:
B1KEP2
LinkDB
All DBs
Position
4637965..4638408
Genome browser
AA seq
147 aa
AA seq
DB search
MPEGTKKLGVLAIAGVEPYQEKPGEEYMNADQLGHFRTILDAWRNQLREEVDRTLNHMQD
EAANFPDPVDRAAQEEEFSLELRARDRERKLIKKIEKTLQKIEEDDFGFCDSCGIEIGIR
RLEARPTADQCIDCKTLAEIKEKQMAG
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggcactaaaaaacttggcgtgctcgctatcgcaggtgtagaaccttatcag
gaaaaacctggtgaggagtatatgaacgcagatcagctgggccatttcagaacgattctg
gatgcttggcgtaatcagttgcgtgaagaggtcgaccgtactcttaatcatatgcaagat
gaagcagcaaactttccagaccctgtggaccgtgccgctcaagaggaggagttcagtcta
gaacttcgtgctcgtgatagagagcgtaagctaattaagaagatcgaaaaaacacttcag
aaaattgaagaggatgatttcggcttctgtgactcatgcggcatcgaaattggtattcgt
cgtctcgaagctcgtccaacagccgatcaatgtatcgattgtaagacgcttgcagagatc
aaagaaaagcagatggctggctaa
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