Shewanella woodyi: Swoo_3893
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Entry
Swoo_3893 CDS
T00676
Name
(GenBank) transcriptional regulator, TraR/DksA family
KO
K06204
RNA polymerase-binding transcription factor
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swd03000
]
Swoo_3893
03021 Transcription machinery [BR:
swd03021
]
Swoo_3893
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_3893
Transcription factors [BR:
swd03000
]
Prokaryotic type
Other transcription factors
Others
Swoo_3893
Transcription machinery [BR:
swd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
Swoo_3893
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA transcription factors
Swoo_3893
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-dskA_traR
Rad50_zn_hook
FimW_N
DUF5312
DUF919
DUF2196
DUF6594
Enkurin
DUF3810
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
ACA88151
UniProt:
B1KFH6
LinkDB
All DBs
Position
4747966..4748361
Genome browser
AA seq
131 aa
AA seq
DB search
MRVTHPNLRQNALKQAPLSSDERAQLLTKLKQELNELEQQLELAHSRGAPVILDQQAVGR
VSRIDAIQQQEMAQASEVLMQQHIVRIKQIFLDTDEYGFCLECGEPIGLGRLTIHPTAEM
CIGCQSEAENC
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
ttgagagttacccaccccaacctacggcagaacgctttgaaacaagccccacttagcagc
gacgaaagagcgcaactgctaaccaagttaaagcaggagctcaatgaattagagcagcaa
cttgagctcgctcattcacgtggtgcacctgtgatattagatcaacaagctgttggtcgg
gtttctcgtattgatgccattcagcagcaggagatggctcaagccagtgaagtgttaatg
caacaacatatagtgcggattaagcagatcttcctcgatactgatgagtatggtttttgc
cttgaatgtggcgaaccaattggtttgggtagattgacgatacaccctacagctgagatg
tgtattgggtgtcaaagtgaggctgagaactgttag
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