Shewanella woodyi: Swoo_3977
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Entry
Swoo_3977 CDS
T00676
Name
(GenBank) integral membrane sensor signal transduction histidine kinase
KO
K18072
two-component system, OmpR family, sensor kinase ParS [EC:
2.7.13.3
]
Organism
swd
Shewanella woodyi
Pathway
swd01501
beta-Lactam resistance
swd01503
Cationic antimicrobial peptide (CAMP) resistance
swd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Swoo_3977
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Swoo_3977
01503 Cationic antimicrobial peptide (CAMP) resistance
Swoo_3977
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
swd01001
]
Swoo_3977
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
swd02022
]
Swoo_3977
01504 Antimicrobial resistance genes [BR:
swd01504
]
Swoo_3977
Enzymes [BR:
swd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Swoo_3977
Protein kinases [BR:
swd01001
]
Histidine kinases
OmpR family
Swoo_3977
Two-component system [BR:
swd02022
]
OmpR family
ParS-ParR (polymyxin-adaptive resistance)
Swoo_3977
Antimicrobial resistance genes [BR:
swd01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
Swoo_3977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
HATPase_c_2
Baculo_PEP_C
Calsequestrin
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACA88234
UniProt:
B1KG97
LinkDB
All DBs
Position
complement(4847006..4848307)
Genome browser
AA seq
433 aa
AA seq
DB search
MKKLIASLVLVVLASIASLGWSISEFANLQSSDTQELTTVEHLRALKLIGAALAKSLDND
QADGSFIDSWNLSNSEKLSLIAETEFILPSSLQSQFNTEASLLLESAEGISLHYRLPNTG
QVLNISTKLVTSTDDSLSLNKLYTMIFYVGVVAILFLWVSPLIRQLLNLSQTAKAFGMGE
LGQRIKLNKTSYIGSIETEFNRMADRIQQLVDDNKLLSRAVSHDLKTPIARLRFGIEVLE
ENQNEQLREKYFQRLNRDLDTMEELVMTLLSYARLDQANIQPEIQPIELNAWLEQKLAKH
NSAACSVSFVPLPQSVIVNSDPKYLSMQVSNLLNNAQGFGQSKVQVLLVVEADQVWIHID
DDGPGIDAEEAEQIIKPFVRGKQSRDNSGHGMGLAIVSRIGLWMGSTLAIGHAPTLGGAR
MSLRFTSFKGSEK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctcatcgcctcactggttctagtggtgttagcctcaattgccagtttaggt
tggtctattagtgaatttgcaaacctacaaagttctgatacacaagagctaacaacggtc
gaacacctaagagcactgaaattgattggggctgccttagcgaaaagcttagataatgat
caagccgatggtagttttattgatagctggaatctatccaactcagagaagctatcactg
atagccgaaacagagtttattctcccttcatcactgcaatctcagtttaataccgaagca
tctctgttacttgagtcagctgaagggatctctctacattaccgattacccaatacagga
caagtgctcaacattagtaccaaattggtgacgtcaactgatgatagcttaagtttaaat
aagctctataccatgatcttttatgtgggtgtggttgctattttattcttgtgggtatcc
cccttgatccgtcagctactgaatttaagccaaactgctaaagcgtttggtatgggagag
ttagggcaaagaatcaaacttaataagacctcctatataggttcaatagagaccgaattt
aatcgtatggcggataggatccagcagttagttgatgataataaactactgagtcgagct
gtgtcccatgatttgaaaacaccaatcgcacgacttaggtttggtattgaggtgttagag
gagaatcaaaatgagcagttacgagagaaatacttccagcgattaaatcgagatctcgac
actatggaggagctggtgatgacgcttctaagctatgctcgtcttgatcaagctaatatt
cagccagagattcaaccgatagagctaaatgcgtggctagagcagaaactcgctaagcac
aatagtgctgcttgctctgttagttttgtacctttgcctcagtcagtcattgttaatagc
gatcctaaatatttatcgatgcaagtgagtaacttgctcaataatgctcaaggctttggt
caatcaaaggtgcaagtattgctggtggtcgaggctgatcaagtgtggatccatattgat
gatgacggtccaggcatagatgcagaggaagctgagcagatcattaaaccttttgttcgt
ggtaaacagagtcgtgataattctggacatggcatggggctggcaattgtaagccgtatt
ggtttgtggatgggttcaacattagcgattggccatgctcctacgcttggtggtgcgcgc
atgtcgcttaggtttacatcttttaaaggctcagaaaaatag
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