Shewanella woodyi: Swoo_4528
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Entry
Swoo_4528 CDS
T00676
Name
(GenBank) UDP-3-0-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
swd
Shewanella woodyi
Pathway
swd00540
Lipopolysaccharide biosynthesis
swd01100
Metabolic pathways
Module
swd_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Swoo_4528
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
swd01005
]
Swoo_4528
Enzymes [BR:
swd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Swoo_4528
Lipopolysaccharide biosynthesis proteins [BR:
swd01005
]
Lipid A
Swoo_4528
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ACA88778
UniProt:
B1KKX2
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All DBs
Position
complement(5490787..5491704)
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AA seq
305 aa
AA seq
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MIFQRTVKEMVKTTGVGLHSGNKVTLSIKPAPVNYGIVLVRTDLEPAVSIPAKADQVRET
TMCTALVNDDGVRISTIEHLFAALAGLGIDNALIEVDAPEIPIMDGSASPWVFLLQSVGI
QEQSAAKKYLRIKDTIRVEDGDKWAELKPFNGFRVDFAIDFNHPEIARSQQHMVMDFSTS
AFVRDISRARTFGFMRDIEYLRANNLALGGSMENAVVLDEYKVLNPDGLRYEDEFVKHKI
LDAFGDLYVAGHAIVGEFCAFKTGHALNNQLVRALLAQQDAWELVSFEKDEAPVSFSVPA
GAVFA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcaaagaactgttaaagaaatggtgaaaacaaccggagtcggattgcattcc
ggcaataaggtgactttgagcatcaagcccgcacctgtaaattacggcattgtattagtg
cgtacggatctggagccagcagtttcaatccctgctaaggctgatcaagttcgtgaaacc
actatgtgtactgcgctagttaatgacgatggtgtacgtatctcgacgattgagcatctg
tttgctgctttagcgggtctaggtattgataatgcattgattgaagtcgatgcacctgag
atcccgatcatggatggcagtgccagtccatgggtattcctacttcaatctgtaggaatt
caagagcaatcagcggctaagaaatatctaagaatcaaagacactatccgtgttgaagat
ggagacaaatgggcggagctaaaaccgtttaatggctttagagtggattttgcaatcgac
tttaaccaccctgaaattgcccgtagtcagcaacatatggtgatggatttttcaacttca
gcattcgtacgcgatattagtagagcaagaacgtttggctttatgcgcgatatcgaatac
ttaagagctaacaacttagccttaggcggaagtatggaaaatgcagtcgtgcttgacgaa
tataaagtcctcaaccccgatggcttgcgttatgaggatgagttcgttaagcataagatt
ttggatgcattcggtgacttatatgttgctggtcatgccattgttggtgagttttgtgct
ttcaaaacgggccatgcactgaataatcaattagtgcgtgcactactagctcaacaagat
gcttgggagctagttagttttgagaaagatgaagcgccagttagcttctctgttcccgcc
ggtgcggtattcgcttaa
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