Formicincola oecophyllae: E3E12_03770
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Entry
E3E12_03770 CDS
T06093
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
swf
Formicincola oecophyllae
Pathway
swf01501
beta-Lactam resistance
swf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E3E12_03770
01503 Cationic antimicrobial peptide (CAMP) resistance
E3E12_03770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
swf03036
]
E3E12_03770
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swf02000
]
E3E12_03770
01504 Antimicrobial resistance genes [BR:
swf01504
]
E3E12_03770
Chromosome and associated proteins [BR:
swf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E3E12_03770
Transporters [BR:
swf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E3E12_03770
Antimicrobial resistance genes [BR:
swf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E3E12_03770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
CusB_dom_1
GO-like_E_set
Motif
Other DBs
NCBI-ProteinID:
QDH13464
UniProt:
A0A4Y6U8F1
LinkDB
All DBs
Position
complement(867404..868783)
Genome browser
AA seq
459 aa
AA seq
DB search
MSFRLSRQPVRPFFHPDVAFKLGNSHVPWGRCVVALLLLAGVGGCKRHGGAAIPPQPVMV
SVVQQQAVPVDIALPGRTDAYEQAMIRPQVSGVVTAMTFQQGGDVHKGQQLYQIYPVPYQ
AALKEAQGQLIKAQAAARQADLLLARYGRLLGPHAVSTQEYDNALASAREAHGALEAAQG
QVTSAQVNLNYSHVSSPIDGRIGRTIYTVGTLVTAGQQDAIAVVTRLDPIYVDVNLPADE
MLRLRADWASGKLERKNGGAAVRLQFGNGLPYDQVGTVALSEVTVSPGTGTQVVRAVMPN
PQKLLLPGMYVVAHMREGVNAHALLVPQVAVERTPKGDAYVMVATPDTTKEGQLHHRGKV
AMQMVKLGNAIGDSWVVEAGLQPGDLVVTEGLQKIQPGKAVTIMPHPVAKPAVPPAAPVP
ANQSVQAPNPTPDLGAHHAHTHAKAPARKHIQKSAGRKP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaggctatcccgccaacctgtccgccccttttttcaccctgacgtggcgttc
aagctgggcaatagtcacgtcccctgggggcgctgtgtggtagcgctgctgcttttggca
ggggtggggggctgcaagcgccatggcggggcggctatcccgccgcaaccagttatggtc
agtgttgtccagcagcaagctgttcctgtggacatcgctttgcctggccgcacagatgcc
tatgaacaggccatgatccgcccccaggtcagcggtgtggtaacggccatgacgttccaa
cagggtggggatgttcacaagggccagcaactttaccagatttacccagttccctatcaa
gctgcccttaaagaggcgcagggccagctgatcaaggcacaggccgccgcccgccaggcg
gatttacttttggcacgctacgggcggcttttggggccgcacgccgtcagcacgcaagaa
tatgacaatgccctggccagcgcgcgtgaagcccacggtgccttggaggcagcgcagggc
caggtgacgtcagcgcaggtgaaccttaattacagccacgtcagctcccccattgatggg
cgcattggccgcaccatctacacggttggcaccttggtgacggcaggtcagcaggatgcc
atcgcggtggtgacgcgtcttgaccccatctatgttgatgtgaacctgcccgctgacgag
atgctacgcctgcgcgctgattgggcgtcaggcaagttggaacgcaagaatggcggcgct
gccgtgcgcctgcagtttggcaatggcctgccttatgaccaggttggcacggtggcgctt
tctgaagtgaccgtcagccctggcacgggcacccaagtggtgcgtgccgtcatgcctaac
ccgcagaagctcctgctgcctggcatgtatgtggtggcgcacatgcgtgaaggtgtgaat
gcccacgccctcctagtgccgcaggtggcggtggagcggacaccgaagggcgatgcttac
gtcatggtggccacgccagacaccaccaaggaaggccagctccaccacaggggcaaagtg
gccatgcagatggtaaagctgggcaacgccataggtgacagctgggtggtggaagccggg
ctgcagccaggtgaccttgtggtgacggaaggactgcagaaaatccagcctggtaaagct
gtgaccattatgccccaccctgtggccaagccagccgtgccgccagcggcgccagtgcca
gccaaccagtctgtgcaggcgcccaaccccacccctgacctgggcgcccaccacgcccac
acgcacgctaaggcgccagcacgcaaacacattcagaaaagcgctggtagaaagccgtga
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