Rhizorhabdus wittichii RW1: Swit_1952
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Entry
Swit_1952 CDS
T00538
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18146
multidrug efflux pump
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi01501
beta-Lactam resistance
Module
swi_M00649
Multidrug resistance, efflux pump AdeABC
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Swit_1952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_1952
01504 Antimicrobial resistance genes [BR:
swi01504
]
Swit_1952
Transporters [BR:
swi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Swit_1952
Antimicrobial resistance genes [BR:
swi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AdeABC [MD:
M00649
]
Swit_1952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ABQ68312
UniProt:
A0A9J9LCD3
LinkDB
All DBs
Position
complement(2186096..2189206)
Genome browser
AA seq
1036 aa
AA seq
DB search
MPRFFIDRPVFAWVIAIVIVLMGLIAIPQLPIERYPTIAPPSITITATYPGATPRTMNDS
VVGLIERELSSVKNLLYFESSTDTSGVAQITATFKPGTDPELAQVDVQNRLKTAEPRLPQ
VVRQTGVFVEAASSGFLVMIAIESKDPHVDPGVLGDYAARNVSEELKRVPGVGRVQLFTS
ERAMRVWIDPAKLLSYSLTMSDVNAAIAAQNAQIAPGAIGSEPTVGEQRVTIPLTVDGQL
QTPEEFRQIVLRANSDGSSVLLGDVARVELASQSFAASARTNGRPTAILAVQLAPGANAV
ATSRGVLERMDELSKSMPDGISYSVPFDTAPFVKISIEKVVETLAEAMVLVFLVMFLFLQ
KFRYTLVPAIVAPIALLGTLSVMLVAGFSVNVLTMFGMVLAIGIIVDDAIVVVENVERLM
AEEGLSPRDATRKAMREITGAIIGITLVLTAVFIPMAFASGSVGAIYRQFTISMAVSILF
SAFLALSLTPALCATILKPVHGHEEKRGFFGWFDRKFDALAGGYQGWIARLLKRTGRMMA
SFAVVLVLLGVGFMNLPSAFLPEEDQGFYITAFQMPADATISRTSEAVSVLERHNKSRPA
VRDTTAVQGFGFSGSGANAALVFTMLKDWKDRDGATAQSEVASAQQATGAIREGVVMSLL
PPSIEGLGNSSGFSLRLQDRAGKGDAALAAAQGQLLGLAAQSKVLQGVYPEGLPPGSSVK
LEIDRRKAQTLGVSFSDIASTLSGAIGSTYINDFPNRGRLQQVIVQAEAASRMKLDDVLN
LYVRNAAGDPVRLGEVVNPHWEVTPLQLVRYNGYPTMRISGSAAPGYSSGAAMKEMERLA
AELPPGFAIEWTGQSLQEKQAGDEALMLLGLSMFVVFLVLAALYESWAIPLSVIMVVPLG
LLGALAAVMVAGLSNDVFFKVGLITIIGLSAKNAILIVEFAKAARDEGMSTIEATIHAAR
LRLRPIIMTSLAFTLGVMPLMLATGASKETQRAIGTGVFGGMISATLLAIFFVPVFFVVM
MKLVERYKKRKPAVEE
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtttcttcatcgaccgaccggtcttcgcctgggtgatcgcgatcgtgatcgtc
ctgatgggcctgatcgcgatcccgcaattgccgatcgagcgctatccgacgatcgcgccg
cccagcatcaccatcaccgccacctatccgggcgccacgccgcggacgatgaacgacagc
gtcgtcggcctgatcgaacgcgagctgtcgagcgtgaagaacctgctctatttcgagagc
tcgaccgacacctcgggcgtcgcccagatcaccgcgaccttcaagccgggcaccgatccc
gaactggcgcaggtcgacgtgcagaaccggctcaagaccgccgagccgcgcctgccgcag
gtggtgcggcagaccggcgtcttcgtcgaggcggcctcgtcgggcttcctggtgatgatc
gcgatcgagtcgaaggacccgcacgtcgatccgggcgtgctcggcgactatgcggcgcgc
aacgtgtcggaggagctgaagcgcgtgcccggcgtcggccgcgtccagctgttcacctcc
gaacgggcgatgcgcgtctggatcgatcccgccaagctgctctcctacagcctgacgatg
agcgacgtgaacgccgcgatcgccgcccagaacgcgcagatcgcgccgggcgcgatcggc
tccgagccgaccgtcggcgaacagcgcgtgacgatcccgctgaccgtcgacggccagctc
cagacgcccgaggaattccggcagatcgtgctgcgcgccaacagcgacggatcgtccgtc
ctgctcggcgacgtcgcccgggtcgagctcgcctcgcagagcttcgccgccagcgcccgc
accaacggccggccgaccgcgatcctcgccgtccagcttgcgccgggcgccaatgcggtc
gccacctcgcgcggggtgctcgagcggatggacgagctgtcgaagtcgatgcccgacggc
atctcctacagcgtgccgttcgacaccgccccgttcgtgaagatatcgatcgagaaggtg
gtcgagacgctcgccgaggcgatggtgctcgtcttcctcgtcatgttcctgttcctgcag
aagttccgctacacgctggtccccgcgatcgtcgcgccgatcgcgctgctcggcaccctg
tcggtgatgctggtcgccggcttctcggtcaacgtgctcaccatgttcggcatggtgttg
gcgattggcatcatcgtcgacgacgcgatcgtggtggtcgagaatgtcgagcggctgatg
gcggaggaggggctgtcgccccgcgacgcgacccgcaaggcgatgcgcgagatcaccggc
gcgatcatcggcatcaccctggtgctgaccgcggtgttcatcccgatggccttcgccagc
ggatcggtcggcgcgatctatcggcagttcaccatctcgatggcggtgtcgatcctgttc
tcggccttcctggcgctgtcgctgaccccggcgctgtgcgcgacgatcctcaagcccgtc
cacggccatgaggagaagcgcggcttcttcggctggttcgaccgcaagttcgacgcgctc
gccggcggctatcagggctggatcgcgcggctgctcaagcggaccggccggatgatggcg
tcgttcgcggtggtgctggtgctgctcggcgtcggcttcatgaacctgccgtcggccttc
ctgccggaggaggaccaaggcttctacatcaccgccttccagatgccggccgacgccacc
atctcgcgcaccagcgaggcggtctcggtgctcgaacggcacaacaagagccgcccggcg
gtgcgcgacacgacggcggtgcagggcttcggcttctccggctcgggcgcgaacgcggcg
ctggtcttcaccatgctcaaggattggaaggaccgcgacggcgcgaccgcgcagagcgag
gtggcgtcggcccagcaggcgaccggcgcgatccgcgaaggcgtggtgatgagcctgctg
ccgccgtcgatcgagggcctcggcaactcgtcgggcttctcgctgcgccttcaggaccgc
gccggcaagggcgatgccgcgctggcggcagcgcagggccagctcctcggcctcgccgcg
cagagcaaggtgctccagggcgtctatcccgagggcctgccgcccggcagcagcgtcaag
ctggagatcgaccgccgcaaggcgcagacgctcggcgtctcgttcagcgacatcgcctcg
acgctgagcggcgcgatcggatcgacctacatcaacgacttccccaaccgcgggcggctc
cagcaggtgatcgtccaggccgaggcggcgtcgcggatgaagctcgacgacgtgctcaac
ctctacgtccgcaacgcggccggcgatccggtgcggctgggcgaggtggtgaatccgcac
tgggaggtcaccccgctccagctcgtccgctacaacggctatccgacgatgcgcatctcc
ggctcggcggcgcccggttattcgagcggcgcggcgatgaaggagatggagcggctcgcg
gccgagcttccgcccggcttcgcgatcgaatggaccggccagtcgctgcaggagaagcag
gccggcgacgaggcgctgatgctgctcggcctgtcgatgttcgtcgtcttcctggtgctc
gcggcgctctacgagagctgggcgatcccgctgtcggtgatcatggtggtgccgctcggc
ctgctcggcgcgctcgcggcggtgatggtcgcggggctgtcgaacgacgtgttcttcaag
gtggggctgatcaccatcatcggcctcagcgccaagaacgcgatcctgatcgtcgagttc
gccaaggcggcgcgcgacgaggggatgtcgacgatcgaggcgacgatccacgccgcccgg
ctgcgcctgcgcccgatcatcatgaccagcctcgccttcacgctgggcgtcatgccgctg
atgctggcgacgggggcgagcaaggagacgcagcgggcgatcggcaccggcgtgttcggc
gggatgatcagcgcgacgctgctggcgatcttcttcgtgccggtcttcttcgtggtgatg
atgaagctggtcgagcgctacaagaagcgcaagccggcggtggaggaatga
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