Rhizorhabdus wittichii RW1: Swit_3843
Help
Entry
Swit_3843 CDS
T00538
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi01501
beta-Lactam resistance
swi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Swit_3843
01503 Cationic antimicrobial peptide (CAMP) resistance
Swit_3843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
swi03036
]
Swit_3843
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3843
01504 Antimicrobial resistance genes [BR:
swi01504
]
Swit_3843
Chromosome and associated proteins [BR:
swi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Swit_3843
Transporters [BR:
swi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Swit_3843
Antimicrobial resistance genes [BR:
swi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Swit_3843
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
YknX_C
HH_EMRA
DUF6079_6th
Motif
Other DBs
NCBI-ProteinID:
ABQ70188
UniProt:
A0A9J9LFM6
LinkDB
All DBs
Position
complement(4221533..4222726)
Genome browser
AA seq
397 aa
AA seq
DB search
MPAAVREGCSMISNMVGRRNGLLLLVCALVAGCSKQKPTPPAPEAGFVVMRTESVPLFIE
LPGRTAAFETSEVRPQVTGVLKARLFEEGGIVRAGQTLYQIDPSLFRASVNQAAANLDNA
RAQRQAAAARAQRLKPLAQIEAVSKQDYTDAEAAARQAEAAVAQTAAQLDTARINLRFTN
VPAPISGRIGRSLVTTGALVTAGQAEAMTTIQRLDPIFVDIQQSSADLLALRRQLAAGSG
TASSATVGLKLEDGSDYPIKGRLEFAEAMVDPQTGTVTLRARFANPNGLLLPGMFVRASL
SQITARNAILVPQTGVSRDPKGQATVVLVGAGDKAELREVVADRTVGDKWLVTSGLKPGD
KVIVEGLGNIRPGQAIRPVPAGSPPLPPATGGRAKAG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgcagttcgcgaaggttgctcgatgatttccaacatggtgggccgccgtaac
gggctccttctcctcgtctgcgcgctggtcgccggctgctccaagcagaagccgacgccg
ccagcgcccgaagcgggcttcgtcgtgatgcgcaccgagtcggtgccgctgttcatcgag
ctgcccggccgcaccgccgccttcgagacatccgaggtccgcccgcaggtgaccggcgtc
ctcaaggcacggctgttcgaggaaggcggcatcgtccgcgccgggcagacgctctaccag
atcgacccgagcctgttccgggcctccgtcaaccaggctgccgccaatctcgacaatgcg
cgcgcgcagcgccaggccgccgccgcgcgggcacagcggctgaagccgctcgcccagatc
gaggcggtcagcaagcaggactataccgacgccgaggccgccgcccgccaggccgaggcc
gcggtcgcgcagaccgccgcgcagctcgacaccgcgcggatcaacctgcgcttcaccaac
gtgccggcaccgatcagcggacggatcggccggtcgctggtcaccaccggcgcgctcgtc
accgccggccaggcggaggcgatgacgacgatccagcggctcgacccgatcttcgtcgac
atccagcaatcgagcgccgacctgctcgcgctgcgccgccagctcgccgccgggagcggc
accgcctcgtcggcgacggtggggctgaagctggaggacggcagcgactatccgatcaag
ggccggctcgaattcgccgaggcgatggtcgatccgcagaccggcaccgtcacgctgcgc
gcgcgcttcgccaatcccaacggcctgctgctgcccggcatgttcgtccgcgccagcctg
tcgcagatcaccgcgcgcaacgcgatcctcgtgccccagaccggggtgagccgcgatccc
aagggccaggccaccgtggtcctggtcggcgcgggcgacaaggccgagctgcgcgaggtc
gtcgccgaccggacggtgggcgacaaatggctggtgacgtcgggcctgaagcccggcgac
aaggtgatcgtcgaaggcctcggcaatatccggcccggccaggcgatccgcccggtcccc
gccggttcgccgccgctgccgcccgcaacgggcgggcgggccaaggccggatga
DBGET
integrated database retrieval system
