Rhizorhabdus wittichii RW1: Swit_4604
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Entry
Swit_4604 CDS
T00538
Name
(GenBank) glutamate dehydrogenase (NAD)
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00220
Arginine biosynthesis
swi00250
Alanine, aspartate and glutamate metabolism
swi00430
Taurine and hypotaurine metabolism
swi00910
Nitrogen metabolism
swi01100
Metabolic pathways
swi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Swit_4604
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Swit_4604
00220 Arginine biosynthesis
Swit_4604
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
Swit_4604
Enzymes [BR:
swi01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase (NAD+)
Swit_4604
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT3
GDH_HM3
GDH_ACT2
GDH_HM1
GDH_HM2
ELFV_dehydrog
CesT
Motif
Other DBs
NCBI-ProteinID:
ABQ70942
UniProt:
A0A9J9HG15
LinkDB
All DBs
Position
complement(5057508..5062169)
Genome browser
AA seq
1553 aa
AA seq
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MDTETARRTASDKHEFTDIFAKALTSGALPGELAGLDGEPLEKAAAFLAHTARRRQPGHA
AIAVQTIAGNVGGSRLMRIAVVNDDMPFLVDSVSAALATQGVEVRRLLHPVIAVRRDEDG
ALTAVLPQGSTGERRESFIYLEAERVDARERQALAQAIEAVLEDVRAAVRDWQAMQIAMR
DDAEGLPDGEGAALLRWLLDQNLTLLGHHVAMAKGEPRDRLGILRVGSRKLWRDSTAKAA
IAWFEKGGAAPLLLKSDCRSTVHRRAPLDLIVTPVRQGKDVTGLSIHAGLWTSAALRTLA
EDIPVLRSRLTAIEERLGFDPKGHAGKALHHALSELPPDLVLALPLDSLEKVVLTAMSLV
DRPRPRLELVRSTLGEHLVAIVWLPRELLTTGRRVAIGEMLAQASGATLSNWSLQLGEGD
IAQIRYMLDLPAGGTVPDNEPLDRRLSEMLRGWEPAVEAQLAEMEAGNRAVRLTLDYAAA
FPIAYRTHSTPAEAATDILRLNALGDGAARGCRLYRGEHDPDHRLRLKIYRRGALIPLSE
AVPVLENFGFRVIEEIPTPLDGGAIGYIHEFKLDLPDADTASRLIEHSAVAEESIAATLE
GRAENDLFNELIVSVGLSPDEALLFRAWFRYLRQTGFAYGLATAVEALKKAPDVARGIIA
YFRALHHPTRNDAAEAERLHAEIETGLKKVTAIDDDRMLRRFRAVVRATLRTNAFSPAAK
EALAFKIDSSGVPGLPAPVPWREIWVYSPRVEGIHLRGGPIARGGLRWSDRRDDFRTEIL
GLMKAQVVKNAVIVPTGAKGGFYPKQLPSPSDRDAWLAEGTESYRVFIRSLLSVTDNIVE
GKVVHPPKVAIRDGDDPYFVVAADKGTATFSDVANAIAVERGFWLGDAFASGGSHGYDHK
AMGITARGAWVSVQRHFAEMGVDVQNDPVRVVGCGDMSGDVFGNGMLLSKSIRLVAAFDH
RHIFLDPDPDAATGWEERNRLFALPRSSWADYDAKLISKGGGIFPRDQKEIPISPQIREA
LDIADEVLDPSALIAAILRSPVDLLWFGGIGTYVKAKSETNAEVGDRSNEAHRVNGEDVR
ARVVGEGANLGVTQAGRIAFAMKGGRINADFIDNSAGVDCSDNEVNIKIALNREMLEGRL
EFDKRNALLVKMTDDVAHIVLEDNRLQTLALSLAERGGAEAMPAQLRVIEILEENGRINR
AVDGFDSNDMLLRRAQEHLGLTRPELAVVLSHGKLALQDAIENSDRTGDPMLAPLLLAAF
PPAMQKGFADAIEAHRLRPQILATKMSNRVINRLGLVAPFEMAEEEGCSLAQVATAYFTV
DALFGLEALFMRIEQAAIGEQARLTLLAALAEIARGHVADLLRSIAAETDIGTMVAMLKP
GLARLDDARADLIRSEARQQSDQLRQRITAEDVDPALIDAVVEIAEIDGAIGTAALASEL
SADEVDVTRAYVVLGEALGLDWAKAAAARFRSADAWERLLIAGLTREFGQIRLDFLARHG
GKGPGEAVTAWLETHRDRAEQFRQTVGRARSAAAPTAAMLAQIAAQARSLLMR
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggataccgagacggccaggcgcacggcttcggacaagcacgaattcaccgacatcttc
gccaaggccctgaccagcggcgcccttccgggcgaacttgccggcctcgacggcgaaccc
ctcgaaaaggcagcggccttcctggcccacaccgcgcggcggcgacagcccggccatgcc
gcgatcgcggtacagacgatcgcgggcaatgtcggcggcagccggctgatgcggatcgcc
gtcgtcaacgacgacatgcccttcctggtcgactcggtctccgccgcgctcgccacgcag
ggcgtcgaggtccgtcgcctgctccaccccgtcatcgcggtccgccgcgacgaggacggc
gcgctcaccgccgtgctgccgcagggatcgaccggcgagcggcgcgaatccttcatctat
ctcgaagccgagcgggtcgacgcccgcgaacggcaggcgctcgcccaggcgatcgaagcg
gtgctcgaagacgtccgcgccgcggtgcgcgactggcaggcgatgcagatcgcgatgcgc
gacgacgccgagggactgcccgacggcgagggagcggcgctgctgcgctggctgctcgac
cagaacctcaccctgctcggccatcacgtcgccatggcgaagggcgagccgcgcgaccgg
ctcggcatcctgcgcgtcggcagccgcaagctgtggcgcgattccaccgcgaaggcggcg
atcgcctggttcgagaagggcggcgcggcgccgctgctgctcaagtccgattgccggtcg
accgtccaccgccgcgcgccgctcgacctgatcgtcaccccggtgcggcagggcaaggac
gtcaccggcctgtcgatccacgccggcctgtggaccagcgccgcgctgcgcaccctggcc
gaggacatcccggtgctgcgcagccgcctcaccgcgatcgaggagcgactgggcttcgac
ccgaagggccatgccggcaaggcgctgcaccatgcgctgtcggaactgccgcccgacctc
gtcctggcgctgccactcgactcgctggagaaggtggtgctgaccgcgatgtcgctggtc
gatcgcccgcgcccgcggctcgaactggtgcgcagcacgctgggcgagcatctggtcgcg
atcgtctggctgccgcgcgagctgctgaccaccggccgccgcgtcgcgatcggcgagatg
ctggcccaggcgtcgggcgcgaccctgtccaactggtcgctccagctcggcgagggcgac
atcgcccagatccgctacatgctcgacctgccggccggcggcacggtgcccgacaacgag
ccgctcgaccggcggctgtccgagatgctgcgcggctgggagcccgcggtcgaggcgcag
ctcgccgagatggaggcgggcaaccgcgcggtgcggctgacgctcgactatgccgccgcc
ttcccgatcgcctaccgcacccattcgaccccggccgaggccgcgaccgatatcctgcgg
ctcaacgcgctgggcgacggcgcggcgcgcggctgccgcctctatcgcggcgagcatgat
cccgaccatcgcctgcggctgaaaatctatcggcgcggcgcgctgatcccgctgtccgag
gcggtgccggtgctggagaatttcggcttccgcgtgatcgaggagatcccgaccccgctc
gacggcggcgcgatcggctatatccacgagttcaagctcgacctgcccgatgccgatacc
gccagccggctgatcgagcatagcgcggtcgccgaggagtcgatcgccgcgaccctcgaa
gggcgcgccgagaacgacctgttcaacgagttgatcgtctcggtcggcctgtcgccggac
gaggcgctgctgttccgcgcctggttccgctacctgcgccagaccggcttcgcctatggc
ctcgccactgcggtcgaggcgctcaagaaggcgccggacgtcgcgcgcggcatcatcgcc
tatttccgcgcgctgcatcacccgacccgcaacgacgcggccgaggcggagcgcctccat
gccgagatcgagaccggcctgaagaaggtgacggcgatcgacgacgatcgcatgctgcgc
cgcttccgcgccgtcgtccgcgcgacgctgcgcaccaacgccttctcccccgccgccaag
gaagcgctcgccttcaagatcgattcgagcggcgtccccggcctccccgcgccggtgccg
tggcgcgagatctgggtctacagcccgcgcgtcgagggcatccacctgcgcggcgggccg
atcgcgcgcggcggcctgcgctggtccgaccggcgcgacgacttccgcaccgagatcctc
ggcctgatgaaggcgcaggtcgtcaagaacgcggtgatcgtgccgaccggcgcgaagggc
ggcttctacccgaagcagctcccctccccgtccgatcgcgacgcctggctggcggaaggc
accgaaagctatcgcgtgttcatccgctcactgctgtcggtcaccgacaatatcgtcgag
ggcaaggtcgtccatccgcccaaggtggcgatccgcgacggcgacgatccctatttcgtc
gtcgccgccgacaagggcacggcgaccttctccgacgtcgccaacgcgatcgcggtggag
cgcggcttctggctgggcgacgccttcgccagcggcggcagccatggctatgaccacaag
gcgatgggcatcaccgcgcgcggcgcctgggtctcggtccagcgccatttcgccgagatg
ggcgtcgacgtgcagaatgatccggtccgcgtcgtcggctgcggcgacatgtcgggcgac
gtgttcggcaacggcatgctgctgtcgaagtcgatccgcctggtcgcggcgttcgaccat
cgccacatcttcctcgaccccgatcccgatgcggcgaccggctgggaggagcgcaaccgc
ctgttcgccctgccccggtcgagctgggccgattatgacgccaagctgatctcgaagggc
ggcggcatcttcccgcgcgaccagaaggagatcccgatctccccgcagatccgcgaggcg
ctcgacatcgccgacgaggtgctcgatccctccgcgctgatcgcggcgatcctcaggagc
ccggtcgacctgctgtggttcggcggcatcggcacctatgtgaaggcgaagtcggagacc
aacgccgaggtcggcgaccgttcgaacgaggcgcaccgcgtgaacggcgaggacgtccgc
gcccgggtggtcggcgaaggcgccaatctgggcgtgacccaggcgggccgcatcgccttc
gcgatgaagggcggccggatcaacgccgacttcatcgacaattcggcgggcgtcgactgc
tcggacaacgaggtcaacatcaagatcgcgctcaaccgcgagatgctcgaaggccggctg
gagttcgacaagcgcaacgcgctgctcgtcaagatgaccgacgacgtcgcgcatatcgtg
ctggaggacaaccgcctgcagacgctggcgctgtcgctggccgaacgcggcggggccgag
gcgatgcccgcgcagcttcgcgtcatcgagatcctggaggagaatggccgcatcaaccgc
gcggtcgacggcttcgacagcaacgacatgctgctgcgccgcgcgcaggagcatctcggc
ctgacccggcccgagctggcggtggtgctgtcgcacggcaagctggcgctgcaggacgcg
atcgagaacagcgaccgcaccggcgatccgatgctcgccccgctgctgctggcggccttc
ccgccggcgatgcagaagggcttcgccgacgcgatcgaggcgcatcgcctgcgtccgcag
atcctggcgaccaagatgtcgaaccgggtgatcaaccggctgggcctggtcgcgccgttc
gagatggccgaggaggaaggctgctcgctggcgcaggtggcgaccgcctatttcacggtc
gacgcgctgttcgggctcgaagcgctgttcatgcggatcgagcaggccgcgatcggcgag
caggcgcggctgacgctgctcgccgcgctggccgagatcgcgcgcggccatgtcgccgac
ctgctccgcagcatcgcggcggagaccgacatcggcacgatggtggcgatgctgaagccc
ggcctcgcccggctcgacgacgcccgcgccgacctgatccgcagcgaggcgcgccagcag
tccgaccagctccgccaacgcatcaccgccgaggacgtcgatcccgcgctgatcgacgcg
gtcgtcgagatcgccgagatcgacggcgcgatcggcacggccgcgctcgccagcgagctt
tcggccgacgaggtcgacgtcacccgcgcctatgtggtgctgggcgaggcgctggggctc
gactgggccaaggccgcggcggcgcgcttccgcagcgcggatgcctgggaacggctgctg
atcgcggggctgacccgcgagttcggccagatccgcctcgacttcctggcgcggcacggc
ggcaagggccccggcgaggcggtcaccgcctggctggagacccatcgcgaccgggccgag
cagttccgccagacggtcggccgcgcccgatcggcggcggccccgaccgcggcgatgctg
gcgcagatcgcagcacaggcccgctcgctgctgatgcggtga
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