Rhizorhabdus wittichii RW1: Swit_4651
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Entry
Swit_4651 CDS
T00538
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi01501
beta-Lactam resistance
swi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Swit_4651
01503 Cationic antimicrobial peptide (CAMP) resistance
Swit_4651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
swi03036
]
Swit_4651
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_4651
01504 Antimicrobial resistance genes [BR:
swi01504
]
Swit_4651
Chromosome and associated proteins [BR:
swi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Swit_4651
Transporters [BR:
swi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Swit_4651
Antimicrobial resistance genes [BR:
swi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Swit_4651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF6280
Motif
Other DBs
NCBI-ProteinID:
ABQ70988
UniProt:
A0A9J9HFT0
LinkDB
All DBs
Position
5117584..5118792
Genome browser
AA seq
402 aa
AA seq
DB search
MPDPVSTPESQIDRGPDGRTLKRVGIGAGAVALIVVGLGVASRISATNELRRTAADAAVP
TVSVVLPGVDGEGAKLLLPGTVQAFNSAAIYARTNGYVRRWLADIGDRVHAGQPLAVLDA
PELDQQLAAARADYQTALANQRLADTTAKRWSAMLAQDAVSRQEADEKAGDLAARTALSN
AALANVKRLQALQGFTRLTAPFDGVVTSRSAQIGALVVAGNAAAQPLFTVSDTHRMRVYV
RVPQGYSASIRPGMEATLSLPEYPGRAFTATLTRSAGAVDAQSGAVLVELQADNRDGALK
PGAFAQVDFRVGAGQGKGVSLPGSAILYGNDGPSVAVVGRDGHVTVKSVAIARDEGATVL
LSGGVAPGERVIDTPPDAIRSGDRVRVQAAAEAAGKGAAHAG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcccgtcagcacccccgaaagccagatcgatcgcggccccgacggccgcacc
ctgaagcgggtgggcatcggcgccggcgcggtcgcgctgatcgtcgtcggcctcggcgtc
gcctcgcgcatcagcgccaccaacgagctgcgccggaccgccgccgacgcggcggtgccg
accgtgtcggtggtgctgcccggcgtcgacggggaaggggcgaagctgctgctgcccggc
accgtccaggcgttcaacagcgccgccatctatgcgcggaccaacggctatgtccgccgc
tggctcgccgacatcggcgaccgggtgcatgcgggccagccgctcgcggtgctcgacgcg
cccgagctcgaccagcagctcgcggccgcccgcgccgattaccagaccgcgctcgccaac
cagcgcctcgccgacaccacggcgaagcggtggagcgcgatgctggcgcaggacgcggtg
tcgcggcaggaggcggacgagaaggccggtgatctcgccgcgcgcaccgcgttgtccaac
gccgccctcgccaatgtgaagcggctccaggcgctgcagggcttcacccgcctgaccgcg
cccttcgacggcgtggtgacgagccggtcggcgcagatcggcgcgctggtcgtcgcgggc
aatgcggcggcgcaaccgctgttcaccgtgtccgatacgcatcgcatgcgcgtctatgtc
cgcgtgccgcagggctattcggcctcgatccgtcccggcatggaagcgacgctgtcgctg
cccgaatatccaggccgcgccttcaccgcgacgctgacccgcagcgcgggcgcggtcgac
gcgcagtcgggcgcggtgctggtcgagctccaggccgacaatcgcgacggcgcgctcaag
ccgggggcgttcgcgcaggtcgacttccgggtcggcgcgggccagggcaagggcgtcagc
ctgcccggcagcgcgatcctctacggcaatgacgggccgagcgtcgcagtggtcggccgc
gacggccatgtcaccgtcaagtccgtcgcgatcgcccgcgacgaaggcgccacggtgctg
ctgtcgggcggcgtcgccccgggcgagcgggtgatcgacacgccccccgatgcgatccgc
agcggcgatcgggtgcgggtgcaggcggcggccgaggccgccggcaagggcgcggcgcat
gcgggctga
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