Syntrophomonas wolfei: Swol_0821
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Entry
Swol_0821 CDS
T00396
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
swo
Syntrophomonas wolfei
Pathway
swo00300
Lysine biosynthesis
swo00550
Peptidoglycan biosynthesis
swo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Swol_0821
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Swol_0821
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swo01011
]
Swol_0821
Enzymes [BR:
swo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Swol_0821
Peptidoglycan biosynthesis and degradation proteins [BR:
swo01011
]
Precursor biosynthesis
Amino acid ligase
Swol_0821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Ferritin
Motif
Other DBs
NCBI-ProteinID:
ABI68141
UniProt:
Q0AYR3
LinkDB
All DBs
Position
937478..938947
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AA seq
489 aa
AA seq
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MKLVELIKNLTIELQDGPLDREISGIAYDSRRVKPGDLFICISGLKSDGHLFAGQAIENG
AVAVLAERQLDTGGKATLLTTPDTRSALALLAANYYGRPSKSIRVVAVTGTNGKTTTTDL
IKAILEEAGKKTAIMGTLYAQVGEIQREMQHTTPEALEIESFMALCREEKADYIVMEVSS
HALQLQRVAEIDFNVAVFTNLTQDHLDFHQNMDNYRAAKLQLFQMIKEEKQNYAIINIDD
PWAEEIFQAATIPCRSYGIKKRSDYQAGELKIDLDGSSFRLHYGDNSLMINMKLIGLFSI
YNALAAISFALQEGIDPGLIQSALARVEGVPGRFEKVDCGQDFAVIVDYAHTPDGLENIL
QTSRELGKKRLICVFGCGGDRDRSKRPLMGEIAAKYSDFCVVTSDNPRSEDPHAIIAEII
PGMDKVEKSRYAIIVDRREAIRHAIHLARTGDLVVIAGKGHENYQLVKDQVLEFDDRKVA
AELLRGKVK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggtggaattaattaaaaatttaaccatagagctgcaagatggtcctttagat
agggagattagtggaattgcttatgattccagacgggtaaaaccaggagatctttttatc
tgcattagcggcttaaagagtgatggacatctttttgccgggcaggcaattgagaatgga
gccgtggcggttttggccgaaagacagctggatacgggaggaaaagcgactttgcttact
acccccgacacccggagtgccctggccttgttggctgccaattattatggccggccttct
aaatccattagggtggttgcagttaccggaaccaatggtaaaaccacaacaacggatcta
atcaaagctattttggaagaggcgggcaagaaaacggccataatgggtactctttatgcc
caggtcggcgaaattcaaagagagatgcaacacactaccccggaagctttggagatagag
agttttatggccttatgccgggaggaaaaggccgactatatagtaatggaggtctcatcg
cacgctttgcagctgcagcgggtggcagagatagatttcaatgtggcggtatttaccaac
ctgactcaggaccacctggattttcatcaaaatatggataattaccgggcagccaagctt
cagctctttcaaatgataaaagaagaaaagcaaaactatgccattatcaatatcgatgac
ccctgggccgaagagatttttcaggctgccaccatcccttgccgtagttatggaataaaa
aagagatccgattatcaagccggcgaactcaagattgacttggatggcagtagtttccgc
ctacattacggagataatagccttatgattaatatgaaactcattggtctttttagtatt
tacaatgccctggcggctattagctttgctctgcaggaggggatcgatccaggcttaatt
caatcggctctggccagggtggagggggtaccggggcgttttgaaaaggttgattgcggg
caggattttgcggtgattgtagactatgcgcatactcctgatggtttggaaaatattctc
caaacctcccgggagttagggaaaaagcgtttgatttgcgtattcggctgtgggggtgac
cgggatcggagtaaaagaccgcttatgggtgaaattgccgccaaatacagcgatttctgt
gtggtgacttccgataacccgcgtagtgaggatccccatgccattattgcggagataatt
cctgggatggataaggtggaaaagtcccgttatgctataatcgtcgaccgcagagaggct
ataagacatgctattcacctggcgcgaacgggtgatttggtggttatagccgggaaaggg
catgaaaactaccaattggtgaaggatcaggtcctggaattcgatgaccggaaagtggca
gcggaattgttgagaggaaaggtaaaataa
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