Shewanella piezotolerans: swp_2308
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Entry
swp_2308 CDS
T00791
Name
(GenBank) Efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
swp
Shewanella piezotolerans
Pathway
swp01501
beta-Lactam resistance
swp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
swp_2308
01503 Cationic antimicrobial peptide (CAMP) resistance
swp_2308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
swp03036
]
swp_2308
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swp02000
]
swp_2308
01504 Antimicrobial resistance genes [BR:
swp01504
]
swp_2308
Chromosome and associated proteins [BR:
swp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
swp_2308
Transporters [BR:
swp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
swp_2308
Antimicrobial resistance genes [BR:
swp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
swp_2308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
BSH_CzcB
HH_MFP_RND
HH_EMRA
Biotin_lipoyl
CzcB_C
BSH_CusB
HH_YBHG
NFACT_N
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
ACJ29053
UniProt:
B8CNT4
LinkDB
All DBs
Position
2402701..2403825
Genome browser
AA seq
374 aa
AA seq
DB search
MKIKAWLFTGLALSTLVIILATVKYLEISAGMAYASAMPEYSETVETVKADSAEYTKTVE
VIGNIVVPHHVVLRNESSGVVASVNFDSGDSVKQGDIIIQLDVDAELANIRSATARETLA
QSIYNRSQKLRHSEAISQEQLDKAVAELAVIKAEIEVLKDKIRKKTIKAPFDGRLGIHTA
KIGAFLDSNSKVVSVSGDTGFVWVDFYVPQPYSKLAVSSQVTISAMNSRGNDVMQAVILA
ANDAVNASVRSRLYRAKLPISSMVLDTNTAVTVSVPVNKVAEVFTVPNQAVLSDQNGQYV
YLVVAEADGKGYRAKYQPIEVLASDAITTMVSQGLDSDDVIASAGAFKLFEGVLVNVQQA
GKLISANKTSMGVH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaaagcatggctgtttacgggtttggctttgagcacattagttatcatttta
gctacggtaaagtacttagagatttctgctgggatggcgtacgcaagtgcaatgccagag
tattcagaaacagttgaaacggtgaaagctgatagcgctgaatatacaaaaacagttgag
gtgataggtaatattgtcgtgcctcatcatgtcgttttacgcaatgagtcttctggcgtg
gtcgccagcgttaattttgactcaggtgatagcgttaagcaaggtgacattattattcaa
ctagatgttgatgctgagttagctaatattcgctcagcaacagcaagagagactttagcg
caatcgatttacaatcgcagccaaaaattacgtcatagtgaagctattagccaagagcag
cttgataaagccgttgctgaactagcggtgattaaggcggaaattgaagtcttaaaggat
aagatccgtaagaaaaccatcaaagctccctttgatggtcgactaggtattcatacagct
aaaataggcgccttcttagatagtaatagtaaagtggtgtcagtctccggcgatacaggc
tttgtctgggttgatttttatgtgccgcaaccttattccaaattagctgtcagtagccaa
gtgacgatatctgcaatgaacagtcgtggcaatgatgttatgcaggctgtgattttagcg
gctaatgatgcggtaaacgctagcgttagaagtcgtttatatcgagcaaaattgcctatc
agttcaatggtacttgatactaatactgcagtcacggtttcggtccctgttaataaagtg
gccgaagtgtttacagtgccaaatcaagctgttcttagcgatcaaaatgggcaatatgtt
tacttggttgtcgcagaggcagatggaaagggctatcgagcaaaataccagcctattgaa
gtgctagcttctgatgcaataacaaccatggtgagtcaagggctagactcggatgatgtt
atcgcctcggccggggcttttaagttgtttgaaggggtattagttaatgtgcagcaagca
ggcaaactaatctcagccaataaaacctcaatgggtgtgcactaa
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