Shewanella piezotolerans: swp_4920
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Entry
swp_4920 CDS
T00791
Name
(GenBank) AcrB/AcrD/AcrF family protein
KO
K18138
multidrug efflux pump
Organism
swp
Shewanella piezotolerans
Pathway
swp01501
beta-Lactam resistance
swp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
swp_4920
01503 Cationic antimicrobial peptide (CAMP) resistance
swp_4920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swp02000
]
swp_4920
01504 Antimicrobial resistance genes [BR:
swp01504
]
swp_4920
Transporters [BR:
swp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
swp_4920
Antimicrobial resistance genes [BR:
swp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
swp_4920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ACJ31538
UniProt:
B8CV62
LinkDB
All DBs
Position
complement(5142887..5146036)
Genome browser
AA seq
1049 aa
AA seq
DB search
MARFFIDRPIFAWVIAIIVMLAGVLSILGLPVSQYPNIAPPSVVISAVYPGASAKTMEDS
VTQVIEQRMTGLDHLRYISSTSDSFGNAQITLTFNAEADPDIAQVQVQNKLQLAMPLLPQ
EVQAQGVNVAKSSAGFLMVVGFVSEDGSLDKNDISDYVGSNIQDPLSRVPGVGTIELFGA
QYAMRIWLDPLKLTQYNLTSMDIISSIREQNAQVSAGQLGGSPSVAGQELNATVSAQSRL
QTADQFKKIIIKADPSGAKVFLEDVARVELGAESYAVESFYNGKPAAGIGIQLATGANAL
ATAEGVRAKIEEMQPFFPEGMEIVYPYDTTPFVEKSIEGVVHTLLEAVVLVFLIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
QEEGLSPIEATKKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVMVAIILTPALCATMLKPIAKGEGHKKTGFFGWFNRKFDALTSRYEDSVAAMIKRAGRT
MMVYLAITVAVGWIFMRMPTAFLPDEDQGILFTQAILPVNSTQEATQNVLEDVTDFYLNA
EGDNVKSVFSVSGFSFAGNGQNMGIAFVGLKDWSERQNPGQDVQSVAGRAMGMFMQMKEA
FVFAFVPPAVIELGTANGFDFYLQDRNGQGHDKLVEARNMLLGMASQNPNLVGVRPNGQE
DAPLYQVHIDHAKLRALSVDIDAVNSVLGTAWGGNYVNDFIDRGRVKKVYVQGEAEYRMQ
PEDMDSWYVRNSQGEMVPFSAFATGSWEYGSPRLERFNGLPAMNIQGGVAPGFSTGEAMN
IIEDMVKKLPPGFGVEWNGLSYEERLSGNQAPMLYALSIVVVFLVLAALYESWSVPFAVI
LVVPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGAGLVEA
TLHAVRVRLRPILMTSLAFGLGVVPLAISSGVGSGSQNAIGTAVLGGMMSSTFMGIFFIP
IFFVIVERMFSKRERDNAKAAKAEAKANK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttatcgatcgccctatttttgcttgggtaatcgccattattgtgatg
ctggcaggggtgttatccatcctcggtttaccagtgtcacaatatcctaatattgcgccg
ccatcggtggtgattagcgctgtttatcctggcgcctctgcgaaaacgatggaagattcg
gtaactcaggttattgagcaacgtatgacaggccttgaccatctgcgttacatttcatcg
accagtgatagttttggtaatgcacaaattaccctaacttttaacgctgaggctgatcct
gatattgctcaggtacaggtgcaaaataagctccagttagccatgcccttgttaccgcaa
gaggtacaggcacaaggtgtgaacgtcgcgaagtcgagtgctggcttcttgatggttgta
gggtttgtttctgaagatggctcgctagataaaaacgatatctcggattacgtgggttca
aacattcaagatcctctcagccgggtaccgggtgtggggactattgagctgtttggtgct
caatatgcgatgcgtatttggcttgatccattaaagctgacccaatataacctgacgagc
atggacattatctcttctattagagagcaaaatgcccaagtctcggcaggacagttaggt
ggttctccatctgttgctggacaagaacttaacgcgacagtttcggcacaaagccgttta
caaactgctgatcagttcaagaaaattattattaaagccgacccttctggtgccaaagtg
ttccttgaagatgtggcacgtgtagagctaggcgctgaaagttatgcggttgagtctttt
tacaatggtaagcctgcagcgggtattggtattcagttggcaacaggtgctaacgcactg
gcgacggctgaaggtgttcgagctaaaatcgaagagatgcaacctttcttccctgaaggg
atggagattgtttatccgtatgacaccacccctttcgttgaaaaatcgattgaaggcgta
gtccatacattacttgaagccgtggtcttagtatttttgatcatgtacctgttcttgcag
aacttccgagccaccctgatcccgactattgctgttcctgtggttctactggggacattt
gcgattttgtcagcggcaggattctcgataaacaccttaaccatgtttgcgatggtgttg
gcaatcggtctattggttgatgacgcgattgttgtagtcgagaacgttgagcgcgtgatg
caggaggagggacttagtccaattgaggccaccaagaagtcgatggatcagatcactggt
gcgcttgtggggattggtttaacgctatcggcagtgttcgttcctatggcatttatgtcg
ggttcaactggtgtgatctacaggcagttctcaataacgattgtatcggcgatggctctg
tcagtcatggtggcgattattcttacgcctgctctttgtgcaactatgctcaaaccgatt
gctaaaggtgaaggccataagaagacaggtttctttggttggtttaaccgtaagtttgat
gcactaacctcgcgttatgaagacagcgttgcagctatgatcaagcgcgccggtcgcact
atgatggtttatttggccattaccgttgctgtaggttggatctttatgcgtatgccaact
gcattcttacctgatgaagatcaggggatcttgtttactcaggctattttgccagtgaac
tcgactcaggaagcgacgcagaatgtactggaagatgttactgacttttacttaaacgct
gaaggcgataatgttaaatctgtatttagcgtatcaggctttagtttcgccggtaacggt
caaaacatggggattgcgtttgttggcttgaaagattggtcggaacgccaaaatccagga
caggatgtgcagtcagtagctggacgtgcgatgggcatgtttatgcagatgaaagaagca
tttgtatttgcgtttgtgccgccggcagttattgagcttggtactgcaaacggtttcgac
ttttatctacaagatcgtaatggtcagggtcacgataaattagttgaagcacgtaatatg
ctacttggtatggcgtcgcaaaaccctaaccttgtgggcgtacgtcctaatggtcaagag
gatgcaccgctttatcaagtgcatatcgaccatgcgaaattgcgtgccttaagtgtcgat
attgatgctgtaaacagtgtgcttggcactgcttggggtggtaattacgtcaatgacttt
atcgatcgtgggcgagtgaagaaagtgtacgtgcaaggtgaagccgagtaccgtatgcag
cctgaagacatggactcttggtatgtgagaaacagtcaaggcgaaatggtacctttctct
gcgtttgctacaggatcatgggaatatggttcgccgcgactagagcgctttaatggtcta
ccagcgatgaatattcaaggtggtgttgcaccaggctttagtactggtgaagcaatgaat
attatcgaagacatggttaagaaattaccaccagggttcggtgttgagtggaatggtcta
tcttatgaggaacgtctctctggtaaccaagcaccaatgctatatgccttgtcaattgtt
gtggtattcctggtattagcggcattgtacgaaagctggtcagtaccatttgcggttatt
ctagtggttcctttggggattattggtgcgctgctggcgatgaatggtcgtggtttacca
aatgacgtattcttccaggtgggtctgttgacaacggtgggactggcaaccaaaaatgcc
atcttaatcgtagaattcgccaaagagttctacgagaaaggggcgggcttggtagaagca
accctgcatgcagttcgagtgcgtctgcgtccgattctaatgacatcattagcatttggt
cttggtgttgtgccactcgctatcagtagcggcgtaggctctggtagccaaaacgcaatt
ggtactgctgtactaggcggtatgatgagttctacctttatggggatctttttcattcca
atcttcttcgtgattgttgagcgtatgttcagtaagcgcgaacgagataatgctaaagcc
gccaaggcagaagctaaagcgaataaataa
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