Streptomyces xiamenensis: SXIM_54620
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Entry
SXIM_54620 CDS
T03904
Name
(GenBank) D-alanine--D-alanine ligase
KO
K15739
D-alanine---(R)-lactate ligase [EC:
6.1.2.1
]
Organism
sxi
Streptomyces xiamenensis
Pathway
sxi01502
Vancomycin resistance
sxi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SXIM_54620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SXIM_54620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sxi01504
]
SXIM_54620
Enzymes [BR:
sxi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.2 acid-alcohol ligases (ester synthases)
6.1.2.1 D-alanine---(R)-lactate ligase
SXIM_54620
Antimicrobial resistance genes [BR:
sxi01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
SXIM_54620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AKG46846
UniProt:
A0A0F7CQR0
LinkDB
All DBs
Position
complement(5939732..5940766)
Genome browser
AA seq
344 aa
AA seq
DB search
MKLGIVFGGRSEEHDVSVKSAREVARHIDPARYEPFFIGITRSGAWKLCADPGPGWDQGE
GPSAVLSPDGTAGGLLVLERGRYGTVALDAVLPVLHGTHGEDGAIQGLLELSGIPYAGCD
IQSSALCMDKSLTYLVARSAGIATPEFRVVTAGESVDAERLGYPVFVKPARSGSSFGVSK
VTRADELPAAVETARRYDSKVLIEGAVVGGEVGCAVLGNGPEPITGEVDRMALSHGFFRI
HQEDDPESGSENSTPLVPADIPAASRDLVRETAKRVYRALGCGGLARVDMFLTDEGTVVL
NEVNTLPGLTSYSRYPRMMEAAGIPLSAVIDRVVSLALTGEARA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcggcatcgtcttcggaggccgttccgaagaacacgatgtctccgtcaagtcc
gcccgggaagtggcgaggcatatcgatcccgcccggtacgaaccgttcttcatcggcatc
accaggagcggcgcctggaagctctgcgccgatcccggaccgggctgggaccagggcgag
ggccccagcgcggtgctgtcgcccgacggcaccgccggcggactgctcgtcctggagcgg
ggccggtacggtaccgtcgccctggacgcggtgctgccggttctgcacggcacccacggc
gaggacggtgcgatccaggggctgctggagctctccggcattccctacgccggctgcgac
atccagagttccgcgctgtgcatggacaagtccctcacctacctcgtcgcccggagcgcg
ggcatcgccaccccggaattccgggtcgtgaccgcgggtgagtccgtggacgccgagcgg
ctggggtatcccgtcttcgtgaagccggcccggtcggggtcgtctttcggcgtcagcaag
gtgacccgcgcggacgaactgccggccgccgtggagaccgctcggcggtacgactccaag
gtgctgatcgaaggggctgtcgtcggtggtgaggtcggctgcgcggtcctcggcaacggc
ccggaaccgatcacgggcgaggtggaccggatggcgctctcccacggcttcttcagaatc
caccaggaggacgatccggaaagcggctctgagaactccactcccctggtgcccgccgac
atcccggcggcctcgcgcgacctcgtccgggagaccgcgaagagggtctaccgtgccctg
ggatgcgggggactcgcccgggtggacatgttcctcaccgacgagggcacggtggtgctc
aacgaggtgaacaccctgcccggcctgacctcctacagtcgttacccgagaatgatggaa
gccgccgggatcccgctctcggccgtgatcgaccgcgtggtctccctggcgctgacggga
gaagcccgtgcgtga
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integrated database retrieval system