Shewanella xiamenensis: MKD32_02080
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Entry
MKD32_02080 CDS
T08228
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sxm
Shewanella xiamenensis
Pathway
sxm01501
beta-Lactam resistance
sxm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MKD32_02080
01503 Cationic antimicrobial peptide (CAMP) resistance
MKD32_02080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sxm03036
]
MKD32_02080
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sxm02000
]
MKD32_02080
01504 Antimicrobial resistance genes [BR:
sxm01504
]
MKD32_02080
Chromosome and associated proteins [BR:
sxm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
MKD32_02080
Transporters [BR:
sxm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MKD32_02080
Antimicrobial resistance genes [BR:
sxm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MKD32_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_RND
BSH_RND
BSH_CzcB
HH_MFP_RND
HH_YBHG
HH_EMRA
RND-MFP_C
BSH_CusB
Biotin_lipoyl
Beta-barrel_YknX
HH_AprE
YknX_C
BSH_LcnD
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
UML94152
LinkDB
All DBs
Position
complement(438927..440045)
Genome browser
AA seq
372 aa
AA seq
DB search
MKKWTLSMLAIAVLAFGSVIGFNLMVKNKIAEAIANMPEAEFPVTAMTLDMQKWQPTIDA
IGFVEPHQGVTISNELAGRVTSINFENGSRVEKGQLLAELDAKVERANLKSKMVQLPAAE
ADFKRLSKLYAQKSVSKQDLDNSESKYLALQADIESLKATIERREISAPFSGLVGIRNIN
LGEYLQPGTDIVRLEDISTMKIRFTIPQTQLPRIAVGQKIHVFVDSYPEQPFEGEIAAIE
PAVFYQSGLIQVQARIPNDNAKLRSGMFARVSILLPELNDQFVLPQTAINFTLYGNSIYL
IKEVEENGKKLARVEQINLTVLERNGNNALVSGALKAGDRIVTSGQIRLSNNSKVTVVED
QALTHSDTMPKL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatggactctaagtatgctagcgatcgctgtacttgcctttggctcagtgatc
ggctttaacctgatggtaaaaaataaaatcgccgaggcgatcgccaatatgccagaggct
gagtttcctgtaacagccatgacattagatatgcaaaagtggcaacccacaattgatgcg
attggctttgttgagccgcatcaaggggtgaccatctccaacgaattagcaggacgcgtc
accagcattaattttgaaaacggtagccgagtggaaaaaggccaactactggccgaactc
gatgccaaagtggaaagagccaaccttaaaagcaaaatggtacaactgcccgccgctgag
gccgacttcaaacgcctttcaaaactctatgcgcaaaagtcagtctctaaacaggattta
gacaatagtgaatctaaatacttggccttacaggcggatattgaaagtttaaaagccact
atcgagcgccgtgaaatcagtgcgcctttcagtggtttagtgggtattcgtaacattaac
ttaggtgaatatcttcagcctggtaccgatattgtgcgtctcgaagatatcagcacaatg
aaaatccgcttcactattccgcaaacccaattacctcgtattgccgtaggtcaaaaaatc
catgtgtttgtggactcttatcctgagcaacccttcgaaggtgaaattgccgcgattgaa
cccgccgtgttttaccaaagcggtctgatccaagtgcaagcacgcattcctaacgataac
gccaaactgcgtagcgggatgtttgcccgagtatccatcctattgccagaactgaacgat
cagtttgtactgccacaaaccgccatcaactttaccctttatggtaactctatttacctc
atcaaagaggtcgaagaaaacggtaaaaagctggctagagtcgagcaaatcaacctgacg
gtattagagcgtaacggcaataacgcgctggtgagtggagcgttaaaagcgggagatcgt
attgtcacctcggggcaaattcgcctcagtaacaacagtaaagtgacagtggttgaagac
caagccctgacccactccgacactatgccaaagctgtaa
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