Shewanella xiamenensis: MKD32_12540
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Entry
MKD32_12540 CDS
T08228
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sxm
Shewanella xiamenensis
Pathway
sxm01501
beta-Lactam resistance
sxm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MKD32_12540
01503 Cationic antimicrobial peptide (CAMP) resistance
MKD32_12540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sxm03036
]
MKD32_12540
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sxm02000
]
MKD32_12540
01504 Antimicrobial resistance genes [BR:
sxm01504
]
MKD32_12540
Chromosome and associated proteins [BR:
sxm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
MKD32_12540
Transporters [BR:
sxm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MKD32_12540
Antimicrobial resistance genes [BR:
sxm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MKD32_12540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CSD2
DUF7801
Pilin_N
Motif
Other DBs
NCBI-ProteinID:
UML92282
LinkDB
All DBs
Position
complement(2834893..2835975)
Genome browser
AA seq
360 aa
AA seq
DB search
MKKIIIIIAILAAAWFGYQAMQPQEQQQAKVKLTPNVVIATASMAQVRDEVEAIGTNKAF
ESVTITPKVTDVVTSLKFDDGDIVKKGDLLVQLQNAEQIAKVKVAQVKVSDNQRELARIS
SLVTSRTVAELERDRLQTLIDTARAELEQAQSSLNDRSIIAPFNGRLGLRQVSVGSLVTP
GTEITTLDDISKIKLDFSVPERFIQDLQPGKLVEAKAVAFPDEIFKGKVISIDSRVNPTT
RAVIVRAEIPNPDLRLLPGMLMKVKLIKRSREALMLPESAIIPIQKEHFVYSVNKDNVIE
RKQVTIGVRTRGWVEITDGLAIGENVVIRGLLKVHPGDVVKTQLAEKFSYLSDANTEPSV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcataattatcatcgctattttggcagcggcatggtttggatatcaagct
atgcaacctcaagagcagcagcaagcaaaagttaagctcacccctaatgtggttatcgcc
accgcttctatggcacaagttcgagacgaagtggaagctattggcacaaataaggcattt
gagtccgtcaccattacgcccaaagtcactgatgtggtgacctcattaaagtttgatgat
ggcgatattgtcaaaaagggcgatttattggtgcaactgcaaaatgccgagcagatagcc
aaagtgaaagtggcgcaggtgaaagtgagtgacaatcagcgtgaattggcgcggattagt
tcgcttgtcaccagtcgaacagtggcagaattagagcgtgaccgcctgcaaaccttaatc
gatacggcccgcgccgagttagagcaggcacaatcttccctcaatgatcgcagtattatc
gccccctttaatggccgtttaggcctgcgccaagtgagcgtgggtagtttagtgacaccg
ggtactgagatcaccacgctcgatgatatctctaagattaaattagatttctcagtgcca
gagcgttttattcaagacttgcagcccggcaagcttgttgaagcaaaagccgtggctttc
cctgatgaaatctttaaaggcaaagtgatttccatcgatagccgtgttaacccaaccacc
cgtgccgtgattgtacgcgccgaaatcccaaatccagatttacgcttactgcctgggatg
ctgatgaaggtcaaactcatcaaacgcagccgcgaggcgctaatgttgcctgagtcggcg
attatcccaattcagaaagaacactttgtttacagtgtgaataaagacaatgtcatcgag
cgtaagcaagtcactattggagttcgtacccgtggctgggtagaaattaccgatggctta
gcgattggtgaaaatgtggtgatccgcggcctgcttaaggtgcatcctggtgatgtggta
aagacccaactggctgaaaaatttagctatctttccgatgctaatacggagccaagcgta
tga
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