Shewanella xiamenensis: MKD32_16370
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Entry
MKD32_16370 CDS
T08228
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00270
Cysteine and methionine metabolism
sxm00450
Selenocompound metabolism
sxm00670
One carbon pool by folate
sxm01100
Metabolic pathways
sxm01110
Biosynthesis of secondary metabolites
sxm01230
Biosynthesis of amino acids
Module
sxm_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
MKD32_16370 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
MKD32_16370 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MKD32_16370 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
MKD32_16370 (metH)
Enzymes [BR:
sxm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
MKD32_16370 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UML92985
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Position
3707546..3711280
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AA seq
1244 aa
AA seq
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MAISLHRASQTLADIRNQLSKRILILDGAMGTMIQGYKLEEADYRGERFKDWHTDVKGNN
DLLVLTQPHIIKQIHTDYLLAGADIIETNTFNATTIAMADYDMQSLSAEINREGARLARE
ACDEIEKATGKPRYVAGVLGPTNRTCSISPDVNDPGYRNIHFDELVTAYCESTRALIEGG
ADIIMVETIFDTLNAKAALFAIETVFDELFGANSPARLPVMISGTITDASGRTLTGQTTE
AFYNSLRHIKPLSIGLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPK
DMASVIQEWASEGMLNIIGGCCGSTPEHIKVIREAVEPFAPRVLPEIPVACRLAGLEPLT
IDAQTLFVNVGERTNVTGSAKFLKLIKEGKFEQALDVAREQVESGAQIIDINMDEGMLDG
VEVMHKFLNLIASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEDKFIEQ
ATLVKRYGAAAIIMAFDEQGQADTKARKVEICTRAYRVLVDKVGFPPEDIIFDPNIFAIA
TGIDEHDNYAVDFIEAIKEIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIK
VGMDMGIVNAGQLAIYDDIDPELKVRVENVVLNLPCPVEGSSNTEQLLEIAEKFRGDGSS
AAKKEDLEWRSWPVNQRLAHALVKGITEFIDEDTEAARQLASRPLDVIEGPLMDGMNIVG
DLFGSGKMFLPQVVKSARVMKKAVAYLNPFIEKEKVAGQSNGKILMVTVKGDVHDIGKNI
VGVVLACNGFEVFDLGVMVSVERILEAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREG
LTIPAIIGGATCSKIHTAVKIAPHYPHGAIYIADASRAVPMVSKLVSNETRQATIDETYA
EYDDMRTKRLSQTKRKEIVSLEAARENRCQHDWANYTPFKPKVLGRQVFDDYPLTDLVDR
IDWTPFFRAWELHGHYPEILTDKVVGVEAQKLFADGQAMLTKIIEEKWLTAKGVIGLFPA
NTVNFDDIELYTDETRTEVEMTTHHLRMQLERVGNDNFCLADFVAPKDSGVADYMGGFAV
TAGHGIDEHVARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQLDNE
ALIREKYKGIRPAPGYPACPDHTEKGLLWELLKPNETIDLNITESYAMFPTAAVSGWYFA
HPKSRYFGVSNIGRDQVEDYAKRKGMTVAETEKWLAPVLDYDPE
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatctctccatcgagccagccaaacactggcagacattcgcaaccagttgtca
aagcgcattctgattttagacggcgccatgggcactatgatccaaggctacaagctagaa
gaagccgattaccgtggcgagcgtttcaaggattggcataccgacgttaagggcaataac
gatctcttagtgctcacacagccacacatcatcaaacaaattcacaccgactacctatta
gccggtgccgatattattgaaaccaacactttcaacgccaccactatcgccatggccgac
tacgatatgcagtcgctgtccgccgaaattaaccgtgaaggtgcgcgcctcgcccgtgag
gcctgtgatgaaatcgaaaaagccacgggtaaaccacgttatgtcgccggtgtgttagga
cccactaaccgtacctgctctatcagccccgatgttaacgatcccggatatcgtaatatc
cactttgatgagttagtgaccgcttactgcgaatcgacccgcgccctgattgaaggcggc
gccgatatcattatggtcgagaccatcttcgataccttaaacgctaaggccgccttattt
gccatcgaaaccgtgttcgatgaactctttggcgctaactcgccagcacgtttgccagtg
atgatctccggcactattaccgatgcctcgggtcgaacccttaccggacaaaccaccgaa
gccttttataactcccttcgccatatcaagccgttatctatcggccttaactgcgccctt
gggccaaaagagctgcgtccctacgttgaagaactgtcacgcatcgccgaatgttatgtc
tcggcgcaccctaacgcgggtctaccaaacgagtttggcggttacgatgaaaccccaaaa
gacatggccagcgttatccaagaatgggccagtgaaggcatgctcaacattatcggcggc
tgctgtggtagcacgcccgagcatattaaggtcattcgtgaagcggtggaaccgtttgcg
ccacgggtattacccgagatccccgtcgcctgccgtttagcaggtttggaaccgctcact
atcgacgcccaaaccctgtttgtgaacgtgggtgaacgtaccaacgtcactggctcggct
aagttcttaaagctgatcaaagaaggcaagttcgagcaggcgctcgatgtcgcccgtgaa
caggtagaaagcggcgcgcagatcatcgacatcaacatggacgaaggcatgctcgatggc
gtggaggtgatgcataagttcttaaatcttatcgcctctgagccagatatcagccgagtg
ccgattatgatcgactcctctaagtgggaagtgattgaagcgggcctcaaatgtattcaa
ggcaagggtattgttaactctatctccctcaaagaaggcgaagataagtttatcgagcag
gcaaccctcgttaaacgctacggcgcagcggccattattatggcgttcgacgagcaaggc
caagccgatactaaagcacgcaaagtcgaaatctgtacccgcgcctaccgcgtgctggtc
gataaggtcggctttccgcccgaagacattatcttcgacccgaatatcttcgcgattgcc
acgggtatcgatgagcacgataactatgctgtcgattttattgaagccattaaagagatt
aaggccaccctgccccacgcgatgatttcgggcggggtgtcgaacgtgtcgttctccttc
cgcggtaacaatccagtgcgtgaggcgattcacgcggtattcctgtaccacgcgattaaa
gtcggcatggatatggggattgtcaacgcgggccagttagcgatttacgatgatatcgac
ccagagcttaaagtacgggtcgagaacgtggtgctcaacctgccttgcccggttgaaggc
tcgagtaatacagagcaattgcttgagattgctgaaaaattccgtggcgatggctcaagt
gccgctaaaaaagaagatttagagtggcgctcatggccagttaatcaacgtttagcccat
gcgctggtcaaaggcatcaccgaatttatcgacgaagatactgaagccgctcgccaactc
gcctcccgtccgctggatgtgatcgaaggcccgctgatggacggtatgaatatcgttggc
gacctgtttggctcgggtaaaatgttcctgccacaggtggtcaaatccgcgcgggtgatg
aaaaaggccgtggcctacctcaatccctttattgaaaaggaaaaagtcgcaggtcagtcg
aacggtaagattttgatggtgaccgtaaaaggcgatgtgcacgatatcggcaaaaatatt
gttggcgtggtgctcgcctgtaatggctttgaagtgttcgatttgggcgtgatggtgtcg
gtagagcgcattcttgaggcggtgaaagaacacaatatcgatattatcggcatgtcgggg
cttatcaccccaagccttgatgaaatggtgcataacgtcaaaaccttccaccgtgaaggg
ctcaccattccagcgattatcggcggcgcaacctgctcgaaaatccatactgcggtgaag
attgcgccccattatccccatggcgcgatttacattgccgacgcctcccgcgccgtgccc
atggtcagcaagcttgtcagcaatgaaactcgccaagcgactatcgatgaaacctacgcc
gaatatgacgatatgcgcaccaagcgtttatcccaaaccaagcgtaaggaaatcgtctcg
ctagaggccgcccgcgaaaaccgctgccagcacgattgggcaaactacaccccattcaaa
cccaaggtgctcggtcgccaagtatttgatgattatccattaaccgacttagtagaccgt
atcgactggacgcccttcttccgcgcgtgggagctgcacggccattaccctgaaatctta
accgataaagtagtcggcgttgaggcgcagaagctgttcgccgatggtcaggcgatgctt
acaaaaatcatcgaagaaaaatggctcaccgccaagggcgtgattgggctgtttcccgcc
aatactgtcaacttcgatgatattgagctgtacactgatgagactcgcaccgaagtagaa
atgactacccatcacctgcggatgcagcttgagcgggtgggtaacgataacttctgtctc
gccgactttgtggcgcccaaagacagcggcgttgccgactatatgggcggatttgcggtc
accgcaggccatgggattgatgagcatgtggcccgctttgaggcgaaccacgatgactac
aacgccattatgctcaagtgtttagccgaccgtttagccgaagcctttgccgagcggatg
cacgagcgcgtacgtaaagagttttggggttatgccgccgatgagcagctcgataacgag
gcgttaattcgtgagaaatacaagggcattcgccctgcaccgggttaccccgcttgcccg
gatcacaccgaaaaaggcctgctgtgggaactattaaagccgaatgaaaccatcgactta
aatattaccgaaagctacgccatgttccccaccgccgcagtatcgggctggtattttgcc
cacccgaaatcccgctactttggcgtgagtaatattggtcgcgatcaggtggaggattac
gctaagcgtaaggggatgacagtcgcagagacggagaagtggctagcgccagtgcttgac
tatgaccctgaatag
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