Shewanella xiamenensis: MKD32_20065
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Entry
MKD32_20065 CDS
T08228
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sxm
Shewanella xiamenensis
Pathway
sxm01501
beta-Lactam resistance
sxm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MKD32_20065
01503 Cationic antimicrobial peptide (CAMP) resistance
MKD32_20065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sxm03036
]
MKD32_20065
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sxm02000
]
MKD32_20065
01504 Antimicrobial resistance genes [BR:
sxm01504
]
MKD32_20065
Chromosome and associated proteins [BR:
sxm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
MKD32_20065
Transporters [BR:
sxm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MKD32_20065
Antimicrobial resistance genes [BR:
sxm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MKD32_20065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
HH_EMRA
BSH_CusB
Beta-barrel_RND_2
HH_AAEA_pHBA
HH_CyaD
HH_CzcB
HH_YBHG
BSH_CzcB
DUF5801
GPS2_interact
HH_AprE
Motif
Other DBs
NCBI-ProteinID:
UML93676
LinkDB
All DBs
Position
complement(4579466..4580614)
Genome browser
AA seq
382 aa
AA seq
DB search
MRQTIKLASVISVALWMAACSPQEDKAAHGGAGPQSMEVGIIKVEAKPQVIQVELPGRSK
AFLEAEVRPQVNGIITKRSFVEGGNVKQGESLYQIDSAPYKAALVSANADLARANASLAS
AKAKAARYQQLVKTNAISKQDFDEAEAAYKEALASVTVAEAAINTAKINLQYTEVLAPIS
GRIGKSSVTAGALVTANQSQTLATIQQLDPINVDIAQSSAQLLRLKAKLKQGKLQAADNA
DVQLVLEDGTIYGHNGKLQFAEVSVDENTGSVILRAEFPNPDGILLPGMYVRAVLNTGTD
PQAILVPQKAITRNAKGQAVAMVVNDQGLVEAKIVTTAEVIDNQWRITAGLEAGDKLIVE
GLQKIRPGAPVTTKVISETQAK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagacaattaaacttgcctcagtaatcagcgtggcgttgtggatggcagcttgt
agccctcaagaggataaagccgctcatggcggcgcggggccgcagagcatggaagttggg
ataattaaagtggaagctaagccacaggttatccaagtcgagttaccgggtcgtagcaag
gcatttcttgaagccgaagttcgtcctcaagtgaatggcattatcactaagcgtagcttt
gtcgaaggcggcaatgtgaagcaaggcgaatctctttatcaaattgattctgcgccttat
aaagctgcacttgtcagtgcaaatgctgacttagctcgagcaaatgcaagccttgcttct
gctaaggcaaaagcggcacgttatcagcagttagttaaaactaacgcgatcagtaaacaa
gatttcgacgaagccgaagccgcttacaaagaagcgctggccagtgtgactgtagcagaa
gcggcaatcaatactgcgaaaatcaatcttcaatacactgaagtattagcgccgatttca
ggccgtatcggtaagtcgagtgtaacagcgggtgcgctagtaacggctaaccaaagccaa
actctggcaaccattcaacagcttgatcctatcaatgtggatatcgctcaatcgagtgct
cagctgttacgcctaaaagccaagctgaagcaaggtaagctgcaggcggcggataacgct
gacgtgcagttagtcttagaagacggcacgatttatggtcacaacggtaagctgcaattt
gctgaagtgagcgtggatgaaaatactggctcagtgatcctacgcgccgagttccctaac
ccagatggcatcttactgcctggcatgtatgttcgtgctgtattgaataccggtaccgat
cctcaagccatcctagtgccgcaaaaagccattacccgtaacgctaagggtcaggccgtg
gcgatggtggtgaacgatcaaggtctagtggaagcaaaaattgttaccacagcggaagtt
atcgacaatcaatggcgtattactgctggtttagaagcgggcgataagttgattgtggaa
ggattacaaaagatccgtccaggtgcaccagtcaccaccaaagttatttctgaaacccaa
gcaaaatag
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