Sphingobium yanoikuyae: A6768_02450
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Entry
A6768_02450 CDS
T05170
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
sya
Sphingobium yanoikuyae
Pathway
sya00020
Citrate cycle (TCA cycle)
sya00270
Cysteine and methionine metabolism
sya00620
Pyruvate metabolism
sya00630
Glyoxylate and dicarboxylate metabolism
sya00680
Methane metabolism
sya00710
Carbon fixation by Calvin cycle
sya00720
Other carbon fixation pathways
sya01100
Metabolic pathways
sya01110
Biosynthesis of secondary metabolites
sya01120
Microbial metabolism in diverse environments
sya01200
Carbon metabolism
Module
sya_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sya_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sya_M00012
Glyoxylate cycle
sya_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A6768_02450 (mdh)
00620 Pyruvate metabolism
A6768_02450 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
A6768_02450 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
A6768_02450 (mdh)
00720 Other carbon fixation pathways
A6768_02450 (mdh)
00680 Methane metabolism
A6768_02450 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
A6768_02450 (mdh)
Enzymes [BR:
sya01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
A6768_02450 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
F420_oxidored
ThiF
3HCDH_N
Glyco_hydro_4
Motif
Other DBs
NCBI-ProteinID:
ATI78976
UniProt:
A0A291MV56
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All DBs
Position
523432..524394
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AA seq
320 aa
AA seq
DB search
MARKKIALIGAGNIGGTLAHLAALKGLGDIVLFDVVEGVPQGKALDLSQCASVEGFDAKI
TGSNDYADIAGADVIIVTAGVARKPGMSRDDLLGINLKVMKAVGEGIAANAPDAFVICIT
NPLDAMVWALREFSGLPANKVVGMAGVLDSSRFNHFLAEEFNVSAKDVTSFVLGGHGDTM
VPVIEYSTVAGIPVPDLIKQGRSTQERIDAIVKRTRSGGGEIVALLKTGSAFYAPATSAI
AMAEAYLGDKKRLLPCAANLTGQYGVDNLYVGVPVIIGKDGVEQVIEIELNDEAKANLQV
SVDAVKELLEACKSIDPSLA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaagaagatcgcgctcattggcgctggcaatatcggcggcacgctcgcgcat
ctcgcggctctcaagggactcggtgacatcgtcctgttcgacgtcgtcgaaggcgttccc
cagggcaaggctcttgacctgtcgcagtgcgcctcggtcgaaggcttcgatgcgaagatc
accggttccaacgactatgccgatatcgcgggcgcggacgtcatcatcgtcaccgccggt
gtcgcccgcaagccgggcatgagccgcgacgacctgctgggtatcaacctcaaggtcatg
aaggccgtgggcgagggcatcgccgccaacgcccccgacgccttcgtcatctgcatcacc
aacccgctcgacgcgatggtctgggcgctgcgcgaattttcgggcctgcccgcgaacaag
gtcgtcggcatggccggcgttctggacagctcgcgcttcaaccacttcctggcggaagaa
ttcaacgtctcggccaaggacgtcaccagcttcgtgctcggcggccatggcgacacgatg
gttccggtgatcgaatattcgaccgtcgctggcatcccggttcccgacctgatcaagcag
ggccgttcgacccaggagcgcatcgacgccatcgtcaagcgcacccgttcgggcggcggc
gagatcgtcgcgctgctcaagaccggttcggccttctatgcgcccgccaccagcgcgatc
gccatggctgaagcctatctgggcgacaagaagcgcctgctgccctgcgccgcgaacctg
accggccagtatggcgtcgacaatctctatgtcggcgtgccggtcatcatcggcaaggac
ggcgtcgagcaagtcatcgagatcgagctgaacgacgaagccaaggccaacctccaggtg
tcggtcgacgccgtcaaggaactgctggaagcctgcaagagtatcgatccctcgctcgcc
tga
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