Sphingobium yanoikuyae: A6768_02995 Help Entry A6768_02995       CDS       T05170                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism sya  Sphingobium yanoikuyae Pathway sya03030   DNA replication sya03410   Base excision repair sya03420   Nucleotide excision repair sya03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sya00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     A6768_02995    03410 Base excision repair     A6768_02995    03420 Nucleotide excision repair     A6768_02995    03430 Mismatch repair     A6768_02995  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:sya03032]     A6768_02995    03400 DNA repair and recombination proteins [BR:sya03400]     A6768_02995 Enzymes [BR:sya01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      A6768_02995 DNA replication proteins [BR:sya03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      A6768_02995 DNA repair and recombination proteins [BR:sya03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      A6768_02995    NER (nucleotide excision repair)     GGR (global genome repair) factors      A6768_02995    MMR (mismatch excision repair)     DNA ligase      A6768_02995   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       A6768_02995 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB DNA_ligase_ZBD HHH_2 BRCT Nlig-Ia PTCB-BRCT DUF7108 Motif Other DBs NCBI-ProteinID:  ATI79076 UniProt:  A0A291MVE9 LinkDB All DBs Position 632445..634556 Genome browser AA seq 703 aa AA seqDB search MTDPASLTEAEAANRLMRLAREVAKHNRLYHDQDAPEISDADYDALIRENNALEAAFPHL IRADSPNAQVGAAATSALKKVPHAVRMMSLDNGFADEDIAEFAARVRRFLALAEDAPVAM TAEPKIDGLSCSLRYEKGELVLAATRGDGTTGEDVTANVRTIADIPERLTGEAIPDLFEV RGEVYMAKADFVALNQRLLDEAEDADKARQFANPRNAAAGSLRQKDASVTASRPLRFLAH GWGAHSALPADTQLGVMQAIASWGLPVSDMLVCVDSIDAILAHYRAIERARADLPFDIDG VVYKVDRLDWQQRLGFVAKAPRWAIAHKFPAERAQTTLEAIDIQVGRTGKLTPVGRLTPV TVGGVVVSNVTLHNADEIERLGVRPGDRVVVQRAGDVIPQVVDNLTRDEVREPFPFPTHC PVCGSEAVREEGEVDYRCTGGLICAAQRFERLRHFVSRAALDIEGLGEKTIEEFLDLGWI KEPADIFRLRTHAGELLGREGWKEKSVDNLLAAIEAKRAPDAAKLLFGLGIRHVGAVTAR DLLKRYTTLPALRTLADEIIALRDQAHETQAKKDKAIAEHIGVENVGAAVGHALADFFHE PHNVEAWDDLLSEVSPPDYVVETTASAVTGKIVVFTGKLETMSRDEAKAQAERLGAKAAG SVSAKTDLVVAGPGAGSKLKQATALGIEVISEQAWADIVRAAG NT seq 2112 nt NT seq  +upstreamnt  +downstreamnt atgaccgatcccgccagccttaccgaagccgaagccgccaaccgcctgatgcgccttgcc agggaggtggcgaagcataaccgcctctatcatgaccaggatgcgccggagatcagcgat gcggactatgacgcgctgatccgcgagaataacgcgctcgaagccgccttcccgcatctg atccgcgccgactcgcccaatgcgcaggttggtgccgccgctacttcggcgctgaagaag gtgccgcacgcggtccgcatgatgagcctcgacaatggctttgccgacgaggatatcgcc gagttcgccgcccgcgtccgccgcttcctggcgctggccgaagacgcgccggtggcaatg accgccgaaccgaagatcgatggcctgtcctgttcgctgcgctatgaaaagggcgaactg gtgctggccgcgacgcggggcgacggcaccacgggcgaggatgtgaccgccaatgtccgc accatcgccgacatccctgagcgcctgaccggcgaagccatccccgacctgttcgaggtg cggggcgaggtctatatggccaaggcggatttcgtggccctcaaccagcggctgctggac gaggcggaggatgccgacaaggcgcgccagttcgccaatccgcgcaatgccgccgccgga tcgctgcgccagaaggacgccagcgtcaccgccagccggccgctgcgtttcctcgcccat ggctggggcgcccatagcgcgctgcccgccgacacccagctaggcgtgatgcaggccatc gcgagctggggcctgccggtgtccgacatgctggtctgcgtcgatagcatcgacgcgatc ctggcccattatcgcgcgatcgagcgcgcgcgtgccgatctgcccttcgacattgacggc gttgtttacaaggtcgaccggctcgactggcagcagcggctcggcttcgtggccaaggcg ccgcgctgggcgatcgcccataaattcccggccgaacgcgcccagaccacgctggaggcg atcgacatccaggtcggtcgcaccggcaagctgacgcccgtggggcgcctgaccccggtg acggtcggcggcgtcgtcgtttccaacgtcacgctgcacaatgccgacgagatcgagcgg ctgggcgtgcggccgggcgaccgcgtcgtcgtccagcgcgccggcgacgtcatcccgcag gtggtcgacaatctcacccgtgacgaagtgcgcgaaccctttcctttccccacccattgc ccggtctgcggatcggaagcggtgcgcgaggagggggaagtcgattatcgctgcaccggc gggctgatttgcgccgcccagcggttcgagcggctgcgccatttcgtcagccgcgccgcg ctcgatatcgaggggctgggtgaaaagacgatcgaggaatttctcgaccttggctggatc aaggagccggccgacattttccgcctgcgcacccatgccggcgaactgctcgggcgtgag ggctggaaggaaaagtcggtcgacaatctgctcgccgcgatcgaggcaaagcgcgcgccc gacgccgccaagctgctgtttggcctcggcatccgccatgtcggcgccgtcaccgcgcgc gatctgctcaaacgctacaccacgcttcccgcgctgcgtaccctggccgacgaaatcatc gccctgcgcgatcaggcgcatgagacgcaggcgaagaaggacaaggcgatcgccgagcat attggcgtggaaaatgtcggcgccgccgtcggccatgcgctcgccgatttcttccacgaa ccccataatgtcgaggcgtgggacgatctcctctccgaagtgtcgccgcccgattatgtc gtcgaaaccaccgccagcgccgtcaccggcaagatcgtcgtcttcaccggcaagctggaa accatgagccgcgacgaggccaaggcgcaggcggagcggctgggcgccaaggcggcggga tcggtcagcgccaagaccgacttggtcgtcgccggccccggcgcgggcagcaagttgaaa caggcgacggcgctcggcatcgaggtgattagcgaacaagcctgggctgacatcgtcagg gcggcaggctag

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