Sphingobium sp. YBL2: TZ53_14850
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Entry
TZ53_14850 CDS
T03855
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00020
Citrate cycle (TCA cycle)
syb00270
Cysteine and methionine metabolism
syb00620
Pyruvate metabolism
syb00630
Glyoxylate and dicarboxylate metabolism
syb00680
Methane metabolism
syb00710
Carbon fixation by Calvin cycle
syb00720
Other carbon fixation pathways
syb01100
Metabolic pathways
syb01110
Biosynthesis of secondary metabolites
syb01120
Microbial metabolism in diverse environments
syb01200
Carbon metabolism
Module
syb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
syb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
syb_M00012
Glyoxylate cycle
syb_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TZ53_14850
00620 Pyruvate metabolism
TZ53_14850
00630 Glyoxylate and dicarboxylate metabolism
TZ53_14850
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
TZ53_14850
00720 Other carbon fixation pathways
TZ53_14850
00680 Methane metabolism
TZ53_14850
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
TZ53_14850
Enzymes [BR:
syb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
TZ53_14850
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GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
F420_oxidored
ThiF
Glyco_hydro_4
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AJR24809
UniProt:
A0A0C5X6P0
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All DBs
Position
3216113..3217075
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AA seq
320 aa
AA seq
DB search
MARKKIALIGAGNIGGTLAHLAALKGLGDIVLFDVVEGVPQGKALDLSQCASVEGFDAKI
TGSNDYADIAGADVIIVTAGVARKPGMSRDDLLGINLKVMKAVGEGIAANAPDAFVICIT
NPLDAMVWALREFSGLPHNKVVGMAGVLDSSRFNHFLAEEFNVSAKDVTSFVLGGHGDTM
VPVIEYSTVAGIPVPDLIKQGRSTKERIDAIVQRTRSGGGEIVALLKTGSAFYAPATSAI
AMAEAYLGDKKRLLPCAANLTGQYGVDNLYVGVPVIIGAGGVEQVVEIELDDEAKANLQV
SIDAVKELLEACKGIDPSLA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaagaagatcgcgcttatcggcgctggtaatatcggtggcacgctcgcgcat
ctggcggctctcaaggggcttggagacatcgtcctcttcgacgtcgtcgaaggcgtgccg
cagggcaaggcgctcgacctgtcgcaatgcgcttcggtcgaaggcttcgacgcgaagatc
accggctccaacgattatgccgacattgcgggtgcggacgtcatcatcgtcaccgccggc
gtcgcccgcaagccgggcatgagccgcgacgacctgctgggcatcaacctcaaggtcatg
aaggccgtgggcgagggcatcgccgccaacgcgcccgacgccttcgtcatctgcatcacc
aacccgctcgacgcgatggtgtgggcgctgcgcgaattttccggcctgccgcacaacaag
gtggtcggcatggcgggcgtactcgactcgtcgcgcttcaaccatttcctcgcggaagaa
ttcaacgtgtcggccaaggacgtcaccagcttcgtgctcggcggccatggcgacacgatg
gtcccggtgatcgaatattcgaccgtcgcgggcatcccggttcccgacctgatcaagcag
ggccgctcgaccaaggaacgcatcgacgccatcgtgcagcgcacccgttcgggcggcggc
gagatcgtcgcgctgctgaagaccggctcggccttctatgcgccggccaccagcgccatc
gccatggctgaagcctatctgggcgacaagaagcgcctgctgccctgcgccgccaacctg
accggccagtacggcgtcgacaatctctatgtcggcgtgcccgtgatcatcggcgccggc
ggtgtcgagcaggtcgtcgagatcgaactggacgacgaagccaaggcgaaccttcaggtg
tcgatcgacgccgtcaaggaactgctggaagcctgcaagggcatcgatccttcgctggcc
tga
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