Sphingobium sp. YBL2: TZ53_14860
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Entry
TZ53_14860 CDS
T03855
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00020
Citrate cycle (TCA cycle)
syb00785
Lipoic acid metabolism
syb01100
Metabolic pathways
syb01110
Biosynthesis of secondary metabolites
syb01120
Microbial metabolism in diverse environments
syb01200
Carbon metabolism
syb01210
2-Oxocarboxylic acid metabolism
Module
syb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
syb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TZ53_14860 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TZ53_14860 (sucA)
Enzymes [BR:
syb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
TZ53_14860 (sucA)
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Paralog
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Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
AJR24811
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Position
3218151..3220946
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AA seq
931 aa
AA seq
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MGYENQDFEIERGPSWARTNWPPIDTDDLTGALDPTQMQVAVKAAAKASGKAVSDADAVS
AADDAIRAQMLIRTYRVRGHLAANLDPLGLTQRDLPADLTPEYHGLNDPDKKVYLGGTLG
LQYATVREIVAILRANYCGNVGLEYMHIADVEERRFLQERLEGKDKEIHFTPEGKKAILA
KVIHAEQYEKFLGRKYVGTKRFGLDGGESMIPALEAIIKYGGAQGVREIVYGMAHRGRLN
VLANVMAKGFRVIFHEFSGGTANPEDVGGSGDVKYHLGTSTDREFDGVKVHMSLVPNPSH
LETVDPVVLGKVRAQQTFRDDLAKHEQVLPVLIHGDAAFAGQGIVWECFGFSGVSGYNTG
GCIHFIVNNQIGFTTSPQFSRGSPYPSDVAKGVQAPILHVNGDDPEAVTFACKLAMEYRQ
TFHRDIVIDMWCYRRFGHNEGDEPSFTQPQMYAKIRQHPPVSDVYSARLKAEGVVDDDFV
AQVTGDFVNHLEEEFEAGKSYKPNKADWFAGRWSGLHKPADAETSRQSVESAISQKLFDS
LGKTLTAIPEGLNVHKTLKRVIDAKAEMFKSGENFDWATGEALAFGSLLSEGYGVRLSGQ
DSGRGTFSQRHAVWTDQDRENKYIPLSTVPHGRFEVLDSPLSEYGVLGFEYGFALADPKS
LVLWEAQFGDFANGAQIIFDQYIASSETKWLRSNGLVCLLPHGYEGQGPEHSSARLERYL
QLCAEGNIQVANITTPANYFHVLRRQMLRPFRKPLIIMAPKSLLRHKLAVSKAEDFLGET
HFKRILSDPNGAADKDTRRLVLCSGKVFYDLMEARDAAGDTDVQIVRIEQIYPFAAEALA
KRIERMTNLEEVVWCQEEPRNNGAWFFVEPYVEEALAAAGKAPMRARYAGRKASASPATG
LAKRHVAEQGALVADALGHSVREEIRRQKKG
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgggttacgaaaaccaggacttcgagattgagcgcggaccgagctgggcgcgcaccaac
tggccgccgatcgacaccgacgacctgaccggggcgcttgaccccacgcagatgcaagtg
gccgtgaaggccgccgccaaggccagcggcaaggcggtttcggatgccgatgccgtaagt
gcggccgacgatgcaatacgcgcgcagatgttgatccgcacatatcgcgtacgtggtcat
ctggctgccaatctcgacccgctggggttgacccaacgcgatctgccggccgacctgacg
ccggaatatcacggcctgaacgatccggacaagaaggtctatctgggcggcacgctgggc
ctgcaatatgcgaccgtgcgtgagatcgtggcgatcctgcgcgccaattattgcggcaat
gtcggcctggaatatatgcacatcgcggacgtggaggaacgccgtttcctgcaggagcgt
ctggagggcaaggacaaggaaatccatttcacgccggaaggcaagaaggcgatcctggcc
aaggtgatccacgccgagcaatatgagaagttcctgggccgcaaatatgtcggcaccaag
cgcttcggcctggacggcggcgaatcgatgatcccggcgctggaagccatcatcaaatat
ggcggcgcgcagggcgtgcgcgagatcgtctatggcatggcgcatcgcggccggctgaac
gtgctcgccaatgtgatggccaagggcttccgcgtcatcttccacgaattttcgggcggc
accgccaatcccgaggatgtcggcggatcgggcgacgtcaaatatcacctcggcacctcg
accgaccgtgagttcgacggcgtcaaggtccatatgtcgctggtccccaatccgtcgcac
ctcgaaaccgtcgatccagtggtgctgggcaaggtgcgcgcgcagcagaccttccgtgac
gacctcgccaagcatgagcaggtgctgcccgtgctgatccacggcgacgcggcctttgcg
gggcagggaatcgtctgggaatgtttcggcttctccggcgtgtcgggctataataccggc
ggctgcatccacttcatcgtcaacaaccagatcggcttcacgaccagcccgcaattttcg
cgcggttcgccttatcccagcgatgtggcgaagggcgtccaggccccgatcctgcacgtc
aatggcgatgatccggaggccgtgaccttcgcgtgcaagctggcgatggaatatcgccag
accttccaccgcgacatcgtgatcgacatgtggtgctatcgccgcttcggccacaatgaa
ggcgacgagccgtccttcacccagccgcaaatgtatgcgaagatccgtcagcatccgccg
gtcagcgacgtctattcggcgcggctgaaggcggagggcgtggtcgacgatgatttcgtc
gcccaggtgacgggcgacttcgtcaaccatctggaggaagagttcgaggccggcaagagc
tacaagcccaacaaggccgactggttcgccggtcggtggtccggcctgcacaagccggcc
gatgccgaaacgagccgccagagcgtcgagtccgccatcagccagaagctgttcgacagc
ctgggcaagacgctgacggcgattccggagggcctcaacgtccacaagacgctgaagcgc
gtgatcgacgccaaggccgagatgttcaagtccggcgagaatttcgactgggcgaccggc
gaggcgctggccttcggatcgctgctgtcggaaggctatggcgtccgcttgtcgggccag
gactccgggcgcggcaccttcagccagcggcacgcggtctggaccgaccaggatagggag
aacaaatatatcccgctctcgaccgtgccgcatggccggttcgaggtgctggattcgccg
ctctccgaatatggcgtgctgggcttcgaatatggcttcgcgctggccgatcccaagagc
ctggtgctgtgggaagcgcagttcggcgacttcgccaatggcgcgcagatcatcttcgac
cagtatatcgcttcgtcggagaccaagtggctgcggtccaacggtctcgtctgcctgctg
ccgcatggctatgaaggccaaggtcccgagcatagctcggcccggctggagcgctatctc
cagctttgcgcggaagggaatatccaggtcgcgaacatcacgaccccggccaattacttc
cacgtcctgcgtcgtcagatgctgcggcccttccgcaagccgctgatcatcatggcgccc
aagtcgctgctgcgccacaagctggcggtcagcaaggcggaggacttcctgggcgaaacg
cacttcaagcgcatcctgtcggaccccaatggggccgctgacaaggacacccgccgcctg
gtgctctgttccggcaaggtgttctacgacctgatggaagcccgcgacgccgcgggcgac
acggacgtgcagatcgtgcgcatcgagcagatctacccgttcgcggccgaagccctcgcc
aagcgcatcgagcgcatgacgaacctggaagaagtcgtctggtgtcaggaagaaccgcgc
aacaacggcgcatggttcttcgtggagccctatgtcgaggaagcgctggcagccgccggc
aaggcgccgatgcgcgcccgctatgccggccgcaaggcgtcggcgtcgcccgccacgggc
ctcgccaagcgccatgtcgctgagcagggcgccctcgtcgccgatgcgctgggtcacagc
gtccgtgaagaaatccgtcgccagaagaaaggctga
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