Synechococcus sp. CC9605: Syncc9605_2552 Help Entry Syncc9605_2552    CDS       T00292                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism syd  Synechococcus sp. CC9605 Pathway syd03030   DNA replication syd03410   Base excision repair syd03420   Nucleotide excision repair syd03430   Mismatch repair Brite KEGG Orthology (KO) [BR:syd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Syncc9605_2552    03410 Base excision repair     Syncc9605_2552    03420 Nucleotide excision repair     Syncc9605_2552    03430 Mismatch repair     Syncc9605_2552  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:syd03032]     Syncc9605_2552    03400 DNA repair and recombination proteins [BR:syd03400]     Syncc9605_2552 Enzymes [BR:syd01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Syncc9605_2552 DNA replication proteins [BR:syd03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Syncc9605_2552 DNA repair and recombination proteins [BR:syd03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Syncc9605_2552    NER (nucleotide excision repair)     GGR (global genome repair) factors      Syncc9605_2552    MMR (mismatch excision repair)     DNA ligase      Syncc9605_2552   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Syncc9605_2552 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT BRCT_2 HHH_8 Nlig-Ia Zn_ribbon_3 DUF4796_N Motif Other DBs NCBI-ProteinID:  ABB36280 UniProt:  Q3AGK2 LinkDB All DBs Position 2367605..2369647 Genome browser AA seq 680 aa AA seqDB search MADPHERAAELRHLLNRAGHAYYVLDAPEMEDTVYDRLYRELLELEQNDPGLQRPDSPTQ RVGGAPAEGFTSVEHRVGMLSLDNAFNRDDLRAWHERLLKVLDRPSDSRLPLVGELKIDG NALALSYRNGVLERAATRGDGSRGEEITANVRTISSIPLRLQIENPPEWVEVRGEAFIPD ATFAAINAEREQRDEALFANPRNACAGTLRQLDPKVVAARRLDFFAYTLHLPGDAQPPGQ WAALEWLNSAGFRVNPNRELCGDLAAIQRFCDHWEQGRHDLPYATDGVVVKLDDLQLQDE AGFTQKAPRWAVALKYPAEEAPTRLLRVGAQVGRTGAITPVAEFEAVPLAGTSVSRATLH NADRIAELDLHLGDTIVVRKAGEIIPEVVRVLPELRPSDATPVQLPQQCPECGSNLVREG DEAATRCVNSSCPAILRGGLRHWVSKGALDVDGLGSKLIEQLVDRGLVGSLADLYRLDAA LLASLDRMGDKSATNLVEALKASKQQPWHRQLYGLGIRHIGEVNAKALAAAFFSIDSLAT AALEAPEQIAELHGIGPEISASLGQWLHTPANQQLLQDLRSVGFSLEASTSEQEAASQAG ADADGVLQGKTLVLTGTLPNLSRSEAKALIETAGGKVSGSVSKKTDYLVAGEAAGSKLTK AESLGVTVLSEADLTALLQP NT seq 2043 nt NT seq  +upstreamnt  +downstreamnt atggctgatccgcacgagcgggccgcggaactgcggcacctgctcaaccgtgccggccac gcttattacgttctcgatgcacccgaaatggaggacacggtctacgaccgcctctatcgc gagctgctcgagctggaacagaacgatccgggcctgcaacggcccgacagtcccacccag cgggtgggcggagctccggcggaagggttcaccagcgttgagcaccgtgtgggcatgctc agcctcgacaacgccttcaaccgcgacgacctgcgggcctggcacgagcggctgctcaag gtgctggaccgtcccagcgacagccgcctgcccctggtgggggaactcaaaatcgacggc aacgccctcgccctgagctaccgcaacggggtgttggaacgggccgccacccggggcgac ggcagccgcggtgaagagatcaccgccaacgtgcgcacgatcagctcgattccgctgcgg ctgcagatcgagaacccacccgaatgggtggaggtgcgaggagaggcgttcatccccgat gccaccttcgcggcgatcaatgccgaaagggagcaacgggatgaagcgctgttcgccaat ccccgcaacgcctgcgccggaaccctgcgccaactggatcccaaggtggtggccgcccgc cggctcgacttctttgcctacaccctgcacctgccgggtgacgcccaaccccccggccaa tgggcagctctggagtggctgaactcggcgggtttccgcgtgaacccgaaccgggagctc tgcggagacctggccgccatccagcgcttctgcgaccactgggagcagggtcgccatgac ctcccctatgccaccgatggcgtggtggtgaagctggacgacctgcagctgcaggacgaa gccggcttcacccagaaggcgccgcgctgggccgtcgccctcaaatacccggccgaagaa gcccccacccgtctgcttcgcgttggcgctcaggtgggccgcaccggtgccatcaccccc gtggccgaattcgaagcggtgcccctggccggcaccagcgtcagccgcgccaccctccac aacgccgatcggatcgctgaactggatctgcacctgggcgacaccattgtggtgcgcaaa gccggggagatcattcccgaagtggtgcgggtgctgccggagctcaggcccagcgacgcc actccggtgcaactgccacagcaatgccccgaatgcggctccaacctggtgcgggaaggc gatgaagccgccacccgttgtgtgaacagcagctgcccggcgatcctgagaggtggcctg cggcactgggtgagcaagggcgccctggatgtggatgggctcggcagcaagttgatcgaa caactggtggatcgcggcctggtgggttcgctggcggatctttaccgcctggatgcagcc ctgctcgccagcctggatcgaatgggcgataagtcggccaccaacctggtggaggccctt aaggcctccaaacaacagccgtggcaccgccagctttatggcctcggcatccgccacatc ggcgaggtcaacgccaaagcactcgcggccgctttcttcagcatcgacagcctggcgaca gcagcgctggaggccccggagcagatcgccgaactgcatggcatcggcccggaaatcagc gccagcctgggccaatggctgcacacccccgccaaccaacagctgctgcaggacttacgc agcgttggcttctccctggaggccagtacctccgagcaggaggccgccagccaagccgga gctgacgccgacggcgtgctgcagggcaaaaccctggtgctcacgggcacactccccaac ctcagccgcagcgaggccaaagcgctgatcgaaacggccggcggcaaggtgagcggcagc gtcagcaagaagaccgactacctggtggcgggcgaagccgccggcagcaaactgaccaaa gccgaaagcctcggggtaacggtgctcagcgaagccgatctcaccgccctgctgcagcca tga

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