KEGG   Synechococcus elongatus PCC7942: Synpcc7942_0447
Entry
Synpcc7942_0447   CDS       T00300                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
syf  Synechococcus elongatus PCC7942
Pathway
syf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:syf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Synpcc7942_0447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syf03400]
    Synpcc7942_0447
Enzymes [BR:syf01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Synpcc7942_0447
DNA repair and recombination proteins [BR:syf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Synpcc7942_0447
 Prokaryotic type
     Synpcc7942_0447
SSDB
Motif
Pfam: HhH-GPD EndIII_4Fe-2S HHH RHH_8
Other DBs
NCBI-ProteinID: ABB56479
UniProt: Q8GMR5
LinkDB
Position
complement(436851..437537)
AA seq 228 aa
MTTPRLSKKQRALAVLAELKQLYPEAPCSLDYETPLQLLVATILSAQCTDARVNLVTPAL
FARFPDAPAFAAADVGEIEELIRSTGFYRNKAKNIHAASRRIVEVYGGEVPQSMPELLTL
AGVARKTANVVLAHAFGINAGVTVDTHVKRLANRLGFTTHTDPIKIEQDLMKLLPQPDWE
NWSIRLVYHGRAVCDARKPACDRCSLADHCSTFRRTARKASGIMENAV
NT seq 687 nt   +upstreamnt  +downstreamnt
gtgacgacacctcgcttgtctaaaaagcagcgggcactggcagttttggctgagctcaag
cagctctatcccgaagcaccctgctcgctggactatgaaacgcccctacaactgctggtg
gcgacgattttgtcagcgcaatgcaccgatgccagggtcaacttggtgacgccggcgctg
tttgcgcgctttcctgatgctcctgcttttgcagcggcggatgtgggtgagattgaagag
ctgatccgctccacggggttttatcgcaacaaggcgaagaacattcatgccgctagtcgc
cgcattgtcgaggtctacgggggcgaagtcccgcaatcgatgccagagttgctgactctg
gcgggggttgcccgcaagaccgccaacgttgtcctagcccatgccttcgggattaatgct
ggtgtcacggtggatacccacgtcaaacggctggcgaatcgcctcggcttcaccactcac
acagatcccatcaagattgagcaggatctcatgaaactgctgccccagcccgactgggaa
aactggtcaattcggttggtctaccatggccgcgccgtttgcgatgcccgtaaacctgct
tgcgatcgctgcagtttggctgaccattgcagcacctttcgccggacagcccgaaaggcc
tctggtattatggagaatgctgtctaa

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