Sediminicola sp. YIK13: SB49_13135
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Entry
SB49_13135 CDS
T04145
Name
(GenBank) isoleucyl-tRNA synthase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SB49_13135
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
syi01007
]
SB49_13135
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syi03016
]
SB49_13135
Enzymes [BR:
syi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
SB49_13135
Amino acid related enzymes [BR:
syi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SB49_13135
Transfer RNA biogenesis [BR:
syi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SB49_13135
Prokaryotic type
Other AARSs
SB49_13135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
Motif
Other DBs
NCBI-ProteinID:
ALM08645
UniProt:
A0A0S1SES5
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All DBs
Position
2942396..2945797
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AA seq
1133 aa
AA seq
DB search
MKFAEYKGLDLPKVAEEILHYWKEHQIFEKSVTSREGKDNYVFYEGPPSANGMPGIHHVM
ARTIKDIFPRYKTMKGFQVKRKAGWDTHGLPIELGVEKELGITKEDIGTKISVEDYNAAC
KKAVMRYTDVWNSMTEKVGYWVDMEDPYITYKSKYMETVWWLLKQIYDKGLIYKGYTIQP
YSPKAGTGLSSHELNQPGTYQDVTDTTVTAQFKVLKETLPNSMKGIDGELFFLAWTTTPW
TLPSNTALTVGPKIEYVVVKTYNQYTFEPTNVVLAKSLVAKQFTGKFEEVETLEAWANYK
QEDKKIPFLVQGSYLGKDLEGIRYEQLLPYAQPYQNPENAYRVITGDFVTTEDGTGIVHT
SPTFGADDALVAKQASPEIPPLLVLDDNGNPVPLVDLQGKFRSEMGEFAGKYVKNEYYNE
GEAPEKSVDVELAIKLKEENKAFKVEKYVHSYPNCWRTDKPILYYPLDSWFIKVTDIKDK
MFQLNQTINWKPKATGEGRFGNWLANANDWNLSRSRYWGIPLPIWRTEDGKEEIIIGSVA
ELKSEMAKAVAAGVLEKDIFAEFVSGDMSEENYDKIDLHKNIVDQITLVSTSGKPMRRES
DLIDVWFDSGSMPYAQWHYPFENKDLIDEGKTFPADFIAEGVDQTRGWFYTLHAIATMVF
DSVAYKNVVSNGLVLDKEGKKMSKRLGNAVDPFTTMEEHGADATRWYMISNANPWDNLKF
DIDGIAEVKRKFFGTLYNTYSFFALYTNIDKFKYEEADIPLKERPEIDQWILSELHSLIK
KVDEAYAEYEPTRATRAISEYVQENLSNWYVRLSRRRFWKGDYQQDKISAYQTLYTCLVT
IAKLSAPVAPFFMDRLYKDLTSGTEKELFESVHLANFPTFDAAMVNPELESKMAKAQTIS
SLVLSIRQKEKIKVRQPLQKIMIPVLDERQREEIEAVADLIKSEVNVKEIELLDDASGVL
VKQIKPNFKTLGPKFGKDMKAIASAVAKLGQEDIQKIEQEGEISLQIENKILILQLQDVE
ISSQDIEGWLVASSGSLTVALDVTINETLRKEGIARELVNRIQNLRKDSGYEVTDKIDVK
LLKDGCVELAVASNIDYIKTETLTAELIFEEKLESGTDISFDQVNTKLFIQKH
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgcagaatacaaagggttagatttaccaaaagttgccgaggagatattacac
tattggaaagagcatcagatttttgaaaaaagtgtaacaagcagggagggtaaggataat
tatgtcttttatgaaggtcccccttctgcaaatggaatgcccggaatccaccatgtaatg
gcccgtacgatcaaggatatatttcctaggtacaagaccatgaaaggtttccaagtgaag
cggaaagcaggatgggacacccatggtcttcccattgaacttggggtagagaaagaattg
ggaatcaccaaagaggatattggcacaaaaatttctgttgaggattacaacgctgcctgt
aaaaaagcagtgatgcgttatactgacgtttggaacagtatgaccgaaaaagtagggtat
tgggtagatatggaagatccttatatcacgtacaaatccaagtacatggagacggtatgg
tggttgctaaagcaaatctacgataagggccttatctacaaagggtataccattcaaccg
tattcccctaaggcaggaacaggtttaagttcccacgagctgaaccaacccggtacctac
caagatgttacagataccacggtaaccgcccaatttaaggtgctgaaggaaacactgccc
aattctatgaagggaattgatggggaattgtttttcttggcttggacaacaacgccgtgg
acattgccttccaatacagctttgaccgttggacccaagatagagtacgttgtggtaaaa
acgtacaaccagtatacctttgaacctacgaacgtagtgttggcaaaatcattggtggcc
aaacaatttacaggtaagtttgaagaagtggagactttggaggcttgggccaattacaaa
caagaagataaaaaaattccatttttggttcaaggctcctatctgggaaaggatctggaa
ggaatcagatatgaacaattattaccatatgcccagccttatcaaaatccagaaaacgcc
tacagggtaatcactggggattttgtgaccacagaggatggtaccggaatagtgcatact
tcacctacttttggggcagatgatgccttggtggctaaacaggcttctcctgagataccg
cctttgcttgtcttggatgataatggcaacccggttccacttgttgatttacaagggaaa
ttccgctcggaaatgggggagtttgccggcaaatatgtgaagaacgaatattacaatgaa
ggagaggcaccggagaaatctgtggatgttgaactggcgattaagttaaaagaagagaac
aaagcctttaaggtagaaaagtatgtccatagttatcctaactgttggcgtaccgataag
cctatattatattacccgttggattcttggttcataaaggtgaccgacatcaaagataag
atgttccaactcaaccagaccatcaactggaagccaaaagctaccggagaaggtaggttt
ggaaattggttggccaatgccaacgattggaatctttcccgatcccgttactggggcata
ccattgcccatttggagaacggaagatggtaaagaagagatcattataggttcagtggca
gaattgaagtcggaaatggccaaggccgttgcggcaggggttttggagaaagatattttc
gcagaatttgtttccggtgatatgtcggaagagaactatgataagatagatctacacaag
aacattgtggatcagattaccctggtttccacttcagggaagccaatgagacgcgagagc
gatcttatagacgtttggtttgacagtggttccatgccatatgcgcagtggcactaccca
tttgaaaataaagatttaatagacgaaggaaaaacgtttccagcagattttattgcggaa
ggtgttgatcagactcgtggttggttttatacgcttcatgctatagctactatggtattt
gattcggttgcctataaaaatgtggtatccaacggcttggtgctggataaggaaggtaaa
aagatgtccaagcgcttggggaatgccgtggatccatttacaacgatggaagaacatggg
gcggatgccacccgatggtacatgatatccaatgccaacccatgggacaaccttaaattt
gacatagatggaattgctgaggttaagcgaaaattttttgggaccctgtacaatacctat
tccttctttgcactttataccaacatagacaaatttaagtacgaggaggcagatatccct
cttaaagaacgtccggaaatagaccaatggattttatccgaactgcattctctcatcaaa
aaagtggatgaggcctatgcagaatatgagcctactcgtgccaccagggccatttcagaa
tatgttcaagaaaacctgagcaactggtatgtgcgtttaagcagaagacgtttttggaag
ggcgattatcagcaggataaaatttcggcttaccaaacattatatacctgtttggtgacc
atagctaaattatccgctccagttgccccattttttatggaccgactttataaagattta
acgtcagggaccgagaaagaactatttgagagtgttcatttagcgaattttcctacattt
gatgcagcgatggtaaatcctgaattggaaagtaagatggcaaaggcacagaccatatcg
tccttggtactttccatacgtcaaaaggaaaaaataaaagtgcgtcaaccattgcaaaaa
attatgattcccgtattggatgaacgtcagagagaagagattgaagctgttgccgatctt
atcaaatctgaagtgaatgtaaaggaaattgaattattggacgatgcatccggagttctg
gtaaaacaaattaagcccaattttaaaactttggggccaaaatttggcaaggatatgaag
gcaatagcaagcgctgtggccaaattgggacaggaggatatccaaaaaattgagcaagag
ggcgaaatatcattacaaattgaaaataaaatccttattttacagttacaagatgtagag
atttcttcccaagatatagaaggttggctagtggccagctcgggatcgttaacagtagcc
ttggatgtaaccattaacgaaacgcttcggaaggaaggaatagctagggaactggttaat
cgtattcagaatttgagaaaggactcagggtatgaggtaaccgataaaattgatgtgaaa
ttattgaaggacggatgtgtggaattggccgtggcaagtaatattgattatattaaaacc
gaaaccttgactgcagagcttatttttgaagagaaattggaaagtggaacggacatctcc
tttgatcaagtgaatacaaaattgtttatccaaaaacattaa
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