Sediminicola sp. YIK13: SB49_14470
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Entry
SB49_14470 CDS
T04145
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00020
Citrate cycle (TCA cycle)
syi00310
Lysine degradation
syi00380
Tryptophan metabolism
syi00785
Lipoic acid metabolism
syi01100
Metabolic pathways
syi01110
Biosynthesis of secondary metabolites
syi01120
Microbial metabolism in diverse environments
syi01200
Carbon metabolism
syi01210
2-Oxocarboxylic acid metabolism
Module
syi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
syi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SB49_14470
09105 Amino acid metabolism
00310 Lysine degradation
SB49_14470
00380 Tryptophan metabolism
SB49_14470
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SB49_14470
Enzymes [BR:
syi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
SB49_14470
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Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
GCV_H
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ALM08863
UniProt:
A0A0S1SEV6
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Position
3248943..3250172
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AA seq
409 aa
AA seq
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MILEMKVPSPGESITEVEIAEWLVKDGDYVEKDQAIAEVDSDKATLELPAEDSGIITLKA
EVGDAVAVGEVVCLIDTSAEKPAGGDKGASAKAEKEEVKEEPKKAEKPAEPAKAKETYAS
GTASPAAKKILEEKNMDASSIKGTGRDGRITKDDAVNAVPSMGTPKGGKRGETRTKLSML
RRKVAERLVMVKNETAMLTTFNEVDMSPIFDLRNQYKEQFKDKHGVGLGFMSFFTKAVIR
ALQMYPSVNSMIDGKEMISFDFCDISIAVSGPKGLMVPVIRNAENLSFRGVEAEVKRLAL
RAREGEITVDEMTGGTFTITNGGVFGSMLSTPIINPPQSAILGMHNIVERPIAKDGKVVI
APIMYVALSYDHRIIDGKESVGFLVAVKEALESPVELLMDNDVTKGLEL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgattttagaaatgaaagttccctctcctggggaatctattaccgaggtagaaatagca
gaatggttggtaaaagatggtgattatgtggaaaaggaccaggccattgccgaggtcgat
tccgataaggccacattggaactgcctgcggaagatagtggaattataactttaaaggct
gaggtcggtgatgcggttgcagtaggagaagtagtttgcttgatcgatacaagtgccgaa
aaaccggccggtggagataagggagctagtgccaaagctgaaaaagaagaggtgaaggaa
gagcctaaaaaggctgaaaaaccagcggagcctgcaaaagcaaaagagacctacgcgtct
gggacagcttccccggcagctaagaaaatattagaggaaaagaatatggatgcctcttcc
atcaaaggcaccggcagggacggtagaatcaccaaagatgatgcagtcaatgcagttcca
tccatgggtacccctaaaggtggcaagagaggtgagacaagaacaaaattatccatgttg
cgccgtaaggtagcggaacgtttggtgatggtgaaaaatgaaacggccatgttgaccact
tttaacgaagtggatatgtcgccaatttttgatcttcgcaaccagtacaaagagcagttt
aaagacaagcacggcgtagggcttggttttatgtcgttcttcaccaaagcagtgatcagg
gcattacaaatgtatccttctgtgaattccatgatagatggcaaagaaatgatctccttt
gatttttgtgatatcagtatcgcggtttccgggcctaaagggttaatggtgcctgttatc
agaaatgcagagaacctatcttttagaggggtagaggcagaagtaaaaagattggcatta
agggctcgtgagggtgagattaccgtggatgagatgacggggggaacctttaccattacc
aatggtggcgtttttggctccatgttgtcaactccaattatcaatcctccgcaaagtgct
attttgggaatgcataatatagtggaaagaccaattgccaaagatggcaaagtggttata
gcgcccattatgtatgtggccctttcctatgaccatagaataattgacggcaaggaatct
gttggtttcttggtagcggttaaagaggcattggagagtccggtagaattgttgatggac
aatgatgtaactaaaggtttggagctataa
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