Shewanella yunxiaonensis: KDN34_10285
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Entry
KDN34_10285 CDS
T07775
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
syk
Shewanella yunxiaonensis
Pathway
syk01501
beta-Lactam resistance
syk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KDN34_10285
01503 Cationic antimicrobial peptide (CAMP) resistance
KDN34_10285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
syk03036
]
KDN34_10285
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syk02000
]
KDN34_10285
01504 Antimicrobial resistance genes [BR:
syk01504
]
KDN34_10285
Chromosome and associated proteins [BR:
syk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KDN34_10285
Transporters [BR:
syk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KDN34_10285
Antimicrobial resistance genes [BR:
syk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KDN34_10285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
NQRA_N
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QUN07615
LinkDB
All DBs
Position
2247191..2248198
Genome browser
AA seq
335 aa
AA seq
DB search
MMVGFGLAVSPAVNAANSDVATLTVVSQKAPHMLVLDGTLEAVKSATVSAQTSGRIVKLN
FDVNDLVPAGAPLLEITSKEQGAELAAAEADYAKAQALNVEAQKTLARYEKLFPQGAISK
GTMDQAIANAKSTKQAASAASAQVTKARESLKYTVVSAPYAGVVTQRHVEVGETVSPGQA
LLSGYATDKMRAVIQVPQRYRGALIKAGAVKVTLADGREFDVTNPVIFGFTDTQSHAYKV
RLPLPDDTPALLPGSWIKARFQVDEREITLIPQTALYSVNELSGVYLKQGDKFVLQQVRL
GETRGNDVEVLAGLQAGDVIATNAYQVLLTHPVQQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatggtggggttcggattagctgtcagccctgcggtgaacgccgcaaacagtgatgtg
gcaacgctgactgtcgtctctcagaaagccccacatatgctggtgttggacggtacactg
gaagctgtaaagtccgctaccgtttccgcccagaccagcggccggattgtaaagcttaat
ttcgacgtgaatgatctcgtcccggctggtgcgccgttattagagatcaccagtaaggaa
caaggggcggagctggctgcagccgaggctgactacgccaaagcacaagcactcaacgtt
gaagcgcaaaagactttggcgcgttatgaaaaattgttcccacaaggagcaatttctaaa
ggaaccatggatcaggctatcgccaatgccaagtccaccaagcaagccgccagtgcggcc
agtgcgcaggtgaccaaagcccgtgagtcattgaaatatactgtggtatctgcaccttat
gctggcgtggtgactcaacgccatgttgaagtcggtgaaactgtcagccccggtcaggca
ctcctttccggatatgcgactgacaagatgcgcgccgtaattcaagtgcctcaacgttat
cgtggagccttgattaaagccggagcggtgaaagtgaccttagcagatggtcgagaattc
gatgttaccaacccggtgattttcggttttaccgacacccaatcgcatgcctataaagtt
cgcttacctttacctgatgataccccagccctattgcctggaagctggattaaagcccgg
ttccaagtcgatgagcgagaaattaccctcattccacaaactgccctttacagcgttaac
gagctgtctggcgtctatctcaagcaaggcgacaagtttgtactgcagcaagtacgctta
ggcgaaactcgcggtaatgatgtggaagtgctggcaggattgcaggctggcgacgtgatt
gctaccaatgcctatcaggtgttgctcacccatcctgtacagcagtaa
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