Synechococcus sp. KORDI-52: KR52_04670
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Entry
KR52_04670 CDS
T03346
Name
(GenBank) secretion protein HlyD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd01501
beta-Lactam resistance
synd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KR52_04670
01503 Cationic antimicrobial peptide (CAMP) resistance
KR52_04670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
synd03036
]
KR52_04670
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synd02000
]
KR52_04670
01504 Antimicrobial resistance genes [BR:
synd01504
]
KR52_04670
Chromosome and associated proteins [BR:
synd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KR52_04670
Transporters [BR:
synd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KR52_04670
Antimicrobial resistance genes [BR:
synd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KR52_04670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
Biotin_lipoyl
Beta-barrel_RND
Beta-barrel_RND_2
YknX_C
BSH_CzcB
BSH_YknX
BSH_CusB
YqfD
HH_YBHG
BSH_Fcp1
CzcB_C
RND-MFP_C
HH_EMRA
BSH_LcnD
DRY_EERY
Motif
Other DBs
NCBI-ProteinID:
AII48440
LinkDB
All DBs
Position
896319..897500
Genome browser
AA seq
393 aa
AA seq
DB search
MSAFWAKASAPLHNPVQSVFAVRHPQRLLLTLAALITVSSCKGEATKQPPPPKVQAVSTQ
MADFTEGVDTVSTLEASNLVELAAQSGGRILELKIRQGDEVEAGQLLVVLDQEQQRALLA
EDKAKADTAKVNYERYQYLAQTGAASQKELDFYRTQFIAAQEKVKSTEATLSYNNLIAPS
AGMVADVTVKVGDVIQQGQVFTSLVQNNELEARVEVPAVFSSRLSLGQPVLLSAPGSYEL
IATGSVGSIDPRVNKQTQGLLVKAVFPNEDGKLRDGQRLRTRVQIKAQEELAVPFAAVTQ
TSGQSFVFRLGTFDELKQNPGKADVEKLEKGIKAGKLPADAMFALQTPVTVGELENQLYP
ITKGLEANQMVVTTNLLNLKHGMPVQVQPAKAN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccttttgggccaaggcgtcagcaccgttgcataatcccgttcaaagcgttttt
gccgtgcgtcatccgcagcgactcctgctcactctcgccgccttgatcacggtcagttcc
tgcaagggtgaggccacgaagcagccgccgccgccgaaagtgcaggctgtttccacccaa
atggctgacttcaccgagggtgtcgacaccgtcagcacattggaagccagcaacctcgtc
gagctcgccgcccaatcaggagggcggattctggagttgaagattcgtcagggcgatgaa
gttgaagccggccagctgctggtggttctcgatcaggagcagcaacgggcactgctagcg
gaagacaaagcaaaggcggacaccgccaaggtgaactacgagcgatatcagtatctcgcc
caaaccggagcggcctctcagaaggagctggatttttatcggacgcagttcattgcggcc
caggagaaggtgaaatccacagaagccacgttgagctacaacaacttgatcgccccttca
gcggggatggtggcggacgtcaccgtcaaggtcggtgatgtgattcagcaggggcaggtg
ttcaccagcctggtgcagaacaacgaactcgaagcccgtgttgaggtgcccgcagtgttc
tcctcgcgtctgtcccttggacagcccgtgctgttgagtgcaccgggcagttacgagctg
attgccactggatcagtgggctcgattgatcccagggtcaacaagcagacccagggtttg
ctggtgaaggctgttttcccgaatgaggatggaaaactgcgggatggtcagcgcctgcgc
acgcgggttcagatcaaggcccaggaagaattggctgttccctttgccgccgtcacgcag
acctcaggccagagctttgtcttccgcctcggcacctttgacgagctcaagcagaatccc
ggcaaggctgatgttgagaagttggagaagggcatcaaggcaggcaagcttcctgcggat
gccatgttcgccctccaaactcccgtcacggtgggggagctggaaaaccagctgtatccg
atcaccaaaggcttggaagccaatcagatggtggtcaccaccaacttgctcaacctgaaa
cacggtatgccggttcaggtgcagcccgccaaggcgaactga
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