Synechococcus sp. KORDI-52: KR52_13085
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Entry
KR52_13085 CDS
T03346
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd00300
Lysine biosynthesis
synd00550
Peptidoglycan biosynthesis
synd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KR52_13085
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KR52_13085
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
synd01011
]
KR52_13085
Enzymes [BR:
synd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KR52_13085
Peptidoglycan biosynthesis and degradation proteins [BR:
synd01011
]
Precursor biosynthesis
Amino acid ligase
KR52_13085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AII50060
LinkDB
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Position
complement(2329473..2330978)
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AA seq
501 aa
AA seq
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MTQALHALLSDAGIAVPQGLANPGVEAITTDSRRVGPGTLFLGLPGERVDGGTFWAKALE
AGAAAAVIGPGAASVHPPGVDEPVVVIQEPVARRIGEISAAFWDHPCRRMALIGVTGTNG
KTTTTHLIEHLAASADQTVGLFGTLVNRWPGHSITATHTTAFADLLQGQLAEAASAGCGL
AAMEVSSHALAQQRVAGCRFAGAVFTNLTQDHLDYHASMEEYFEAKAALFADPLLLADGV
RSVINSDDPWGARLAERLGAACWRSSLEDPSAELHMSDLQMTAAGVEGRLISPLGEGRFR
SPLLGRFNLMNVLQAVGVLLQQQLPLPVLLEAISHFGGVPGRMERVILHGVDEADLPPVL
VDYAHTPDGLDNALSAARPFCTGRLICVFGCGGDRDRGKRPQMAAIASRLADRVVVTSDN
PRTEDPQQILDDVVAGILADSDFLVEGDRAKAIASAIAGAEANDLVLVAGKGHEDYQILG
TEKVHFDDREQAECALRQRLF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggcgttgcatgccctgttgagcgatgcaggcatcgcggtgccgcaagggttg
gcgaaccctggggtggaggcaatcaccaccgattcccgtcgcgtcggccccggaaccctc
ttcctcggtcttccaggggaacgggtggatggcggaaccttctgggcaaaggccctggag
gccggtgccgccgctgctgtcattgggcctggagctgcttcagttcacccgcccggtgtg
gatgaacccgttgtggtgatccaagagccggtggcgcgtcggattggtgagatctcagcg
gccttctgggatcacccatgcaggcgcatggccctgatcggtgtgacgggcaccaatggc
aaaaccaccaccacccatttgatcgagcatctggccgcctcagcagatcagaccgttggc
ctgttcggcaccttggtcaaccgctggccaggccacagcatcacggccacccacaccacg
gcctttgccgaccttttgcaggggcaactcgccgaggctgcctctgccggctgtggcctg
gcagccatggaagtgagctcccatgctttggcgcagcagcgggtggcgggctgccgcttc
gctggtgctgtgttcaccaacctcacccaggaccacctcgactaccacgcctcgatggag
gagtacttcgaggccaaggcagcactgtttgcggatcctctgctgcttgccgacggcgtg
agatccgtgatcaacagcgatgacccctggggggcgcggttggctgagcgtctgggcgcc
gcctgttggcgcagttcgctggaggatccatcggccgaactgcacatgagcgacctgcag
atgacggccgcaggggtggaggggcgtttgatcagccccctgggtgagggccgtttccgt
tcgcccttgttgggtcgcttcaacctgatgaatgtgctgcaggcggtgggggtgttgctt
cagcagcagttgcccttgccggtgttgctggaggccatcagccatttcggtggcgtgccc
ggccggatggagcgggtgattctgcacggggtggatgaagcggatctgccgccggtgctg
gtggattacgctcacactcccgatggcttggacaacgctctttcagcggcgcgcccgttc
tgcacggggcggttgatctgtgttttcgggtgcggcggtgaccgggatcggggcaagcgt
ccgcagatggcggcgattgcgtctcgcctggctgaccgcgtcgtggtgacctccgacaac
ccccgcaccgaggacccacagcagatcctcgatgacgtggtagctgggatcctggccgac
agcgattttctggtggagggtgatcgggccaaggcgattgcctcagccattgcaggagct
gaggcgaatgatctggtgctggtggccggcaaggggcacgaggattaccagatcctcggt
accgaaaaggtgcacttcgacgatcgcgagcaagcggaatgcgccctgcggcagaggttg
ttttga
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