Synechocystis sp. PCC 7338: HTZ78_02115
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Entry
HTZ78_02115 CDS
T10297
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
synh Synechocystis sp. PCC 7338
Pathway
synh01501
beta-Lactam resistance
synh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
synh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HTZ78_02115
01503 Cationic antimicrobial peptide (CAMP) resistance
HTZ78_02115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synh02000
]
HTZ78_02115
01504 Antimicrobial resistance genes [BR:
synh01504
]
HTZ78_02115
Transporters [BR:
synh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HTZ78_02115
Antimicrobial resistance genes [BR:
synh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HTZ78_02115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QUS59594
LinkDB
All DBs
Position
437418..440642
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AA seq
1074 aa
AA seq
DB search
MSSPNSAFSLSGLAIRRHIATLMLTLAIIVLGVFAVFSLPVDLLPSITYPRIGVRLDAPG
VSPEVAVDEITRPLEAALSATEGVVQVYSQTREGQISLDLFFEPGGNIDQALNDATATFN
RARNQLPDNLETPRLFKFDPSQLPVYEFAVTSPELSGPSLRVFAEEELARELGVVSGVAS
VNVSGAAQEEVRVNIDLQRLQRSGMSLTQVLDALQSRNVDISGGRIVGTESEPLTRTVGR
FASAQEIEDLVVGTVPGPDGQPAQKVYLRDVANIIDGTEEERIFVTLNGSPAVKVSVQKQ
PEANTIEVVDGVKKRLDELRREGIIPQEAELTTTLDDSVFIRNSVNNVVVSGLIGTTLAA
IAVLLFLGSLRQTLIIVLAIPLATMAAIIVMKAFGLSLNVFSLGGLALGVGIVVDNSIVM
LETIAEGAGMTPGKVNSVPLTKGEMRHQAIASSQTVESALVASTSTNLVAVLPFLMIGGF
IALIFNELILTISFAVAASILVAVTLVPMAASRLLAIRQRSGLGNWFFFREFNRRFAGAT
AAYARFLSILIRHRLVAVACIFIVFGGSSIWMIQQIPQEILPRINTGQANMFAQFPPGTP
LEDNKRLMAIVDDILINQPETEYAFTTVGGFLFGSNVNANALRSSSTITLKPNTDVEAFT
ERVTAELEALNLVDIRLRVAPGQLRGLILSNSPLRNVDVDVILQGNDADGLDQAGRAVLA
ELGEKVTLARFRPDADPRQPEVQILPDWARATELGLTTQAIGQTIQTALDGAVPTQLQRE
NRLVDVRVKLDNDLLSGPGDLAQIPLFIDGDRPIRLGDVARIDQGRAPGEIQRINQRPVF
LIAGTLVEGARLSEALEQVDQVLSAMELPPGVSRLPSTAAASNEQLQSSLVVLGGLAAFL
VFVVMAVQYNSLLDPLVIMFTLPLALAGGILGLYVTQTAIGATVIVGTVLLVGIVVNNAI
IMVELANQIWVQEGISREAAILRAAPQRLRPILMTTITTVLGMFPLALGIGQGSELLQPL
GIVVFSGLSLATLLTLFLIPCLYVLLHQWEGVDLEKVKTDLESRLTEEDIPTKI
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccccaattctgcttttagcctgagtggcctggccatccgtcggcacattgct
accctcatgctcaccctggccattattgtgttgggggtgtttgcagttttttccctacca
gtagatctgttaccttccatcacctatccccgcattggggtgcgactagatgccccaggg
gtttctccggaagtggcggtggatgaaattacccgacctctggaagcggccctatcggcc
acggagggagtggttcaggtttattcccagaccagggaggggcagatcagtctcgatcta
tttttcgagcccgggggaaatattgaccaggcattgaatgatgccacggcgacttttaac
cgagcccgcaatcaactaccggataatttagaaacgccccgattatttaagtttgaccct
tcccaattgccggtgtacgagtttgcggtgacttccccagaattgtcggggccgtcgttg
cgggtatttgcagaggaagagttagcccgggaactgggggtagtgtcgggggtggcatcg
gtgaatgtgtcgggggcggcccaagaggaggtgcgggtaaatatcgatttacaacggcta
cagcggtcggggatgagcttaacccaggttttggatgctttgcaaagtcgcaatgtggat
atttctgggggcagaattgtcggcacggagtcggaacccctcacccgtacggtgggaagg
tttgcttcagcccaggaaattgaggatttggtagtggggacggtgccggggccggacgga
caacccgcccaaaaagtctatttacgggatgtggctaatattattgatggcacagaagag
gaacgaatttttgtcaccctcaacggtagccccgcagtgaaagtgagtgtgcagaaacaa
ccagaggctaacaccattgaagtggtggatggagtcaaaaaacgcttggatgagttacgc
agggaggggattattccccaggaggcagaacttaccactaccttggatgattcggtcttt
attcgtaactcggttaacaatgtcgtagtgtccgggctcattggcactaccctggcggcg
atcgccgttttactctttctgggctctttgcggcaaacgctaatcattgtcttggccatt
cccctggccaccatggcggccattattgtcatgaaggcctttggcctatctctgaacgtt
tttagtttggggggcttggctctgggggtaggcattgtggtggataactccattgtgatg
ttggaaaccattgccgaaggggcgggcatgaccccgggcaaagttaattcggtacccctg
actaaaggggaaatgcggcatcaggcgatcgccagcagtcaaacagtggagtcagctttg
gtggcttccactagcactaacctggtggcggtgttgccatttttaatgatcggtggcttc
attgccctgatttttaacgaattaattttaaccattagttttgcggtggcggcttccatc
ctggtggcggtaaccctagtgcccatggccgcttcccgtttactggctattcgacaacgg
agtggtttaggtaattggtttttctttcgggaatttaatcgacgttttgcaggagccaca
gcggcctacgcccgtttcctctccattttgatccgccatcgactggtggctgtagcctgc
attttcatcgtttttgggggcagcagtatttggatgatccaacaaattccccaggaaatt
ttgccccgcatcaacactgggcaagccaacatgtttgcccagtttccccccggcactcct
ttggaagacaacaaacgtctgatggcgatcgtggatgacattctgattaaccaaccggaa
acggaatatgcctttaccaccgtggggggctttctctttggtagcaatgtcaatgccaat
gccctccgtagttccagcaccattactcttaaacccaatactgatgtggaagcttttacg
gagcgggttacggcggaactagaagcattgaacttggtggatattcgcctgcgggtagcg
ccggggcagttgcgaggcttaattttgagtaattcgcccttgcgtaatgtagatgtggat
gtaattctgcagggcaatgatgctgatgggttagatcaggcggggcgggccgtgttggcg
gaattgggggaaaaagtgacattggcccgctttcgtcccgatgcagatccccgacaaccg
gaagtacaaattctgccggattgggctagggcaacggagctaggtttaaccacccaagcc
atcggacaaaccatccaaactgccttagatggggcggtacccactcagttgcaacgggaa
aatcgcctggtggacgtgcgggtaaaattggacaatgacctcctctctggccctggagac
ctggcccaaattcccctatttattgatggcgatcgcccaattcgtttgggggacgtggcc
cgtattgaccaaggccgagcaccgggggaaattcagcgcattaaccaacggccggtattt
ttaattgccggaaccttagtggaaggggcccgcctcagtgaagccttggaacaggtggat
caagttttatctgccatggagttaccccctggggtttcccgactccccagtacggcggcc
gctagcaatgaacaattacagtcttccctggtggttttagggggcttggcggcgttcctc
gtttttgtggtcatggcggtgcaatacaattccctcctcgatcccctggtgattatgttc
actctccccttagccttggctgggggtattttgggtttatacgtcacccaaacggcgatc
ggggccacggtaattgtgggcacagttctcctagtgggtattgtggtcaacaacgccatc
attatggtggaattagccaatcaaatctgggtccaggagggcatcagccgggaagccgct
atcttgcgggcagctccccaacgattacgccccattttaatgactaccatcaccaccgtg
ttgggaatgtttcccctggctctgggcattggtcaaggctcggaattactgcaacccttg
ggcattgtggttttttctggtctctccctagcaactttgttgactctatttctaattcct
tgtttatacgtgttgctacaccaatgggaaggggtagatttagaaaaagtcaaaacagat
ttggagtcccgcttaaccgaggaagatatccctaccaaaatttaa
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