Synechococcus sp. KORDI-100: KR100_01670
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Entry
KR100_01670 CDS
T03344
Name
(GenBank) RND transporter
KO
K18138
multidrug efflux pump
Organism
synk
Synechococcus sp. KORDI-100
Pathway
synk01501
beta-Lactam resistance
synk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KR100_01670
01503 Cationic antimicrobial peptide (CAMP) resistance
KR100_01670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synk02000
]
KR100_01670
01504 Antimicrobial resistance genes [BR:
synk01504
]
KR100_01670
Transporters [BR:
synk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KR100_01670
Antimicrobial resistance genes [BR:
synk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KR100_01670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AII42116
UniProt:
A0A076GY82
LinkDB
All DBs
Position
complement(333735..337031)
Genome browser
AA seq
1098 aa
AA seq
DB search
MSFSDNFIKRPVLTTVCSILIVLVGVIAIPTLPIANLPNIANPLIQVSAVYGGANAEVTE
QAVTNPLEQQINGVPGMSYITSNSDMLGNSTVSVYFDQTTDIDIDQVNVQNRVSLAMPQL
PEQVSATGVSVEQSTPSILLAYEVGSTEGQFDAGYLNGLIYDQLYYPLSRINGVATVTVY
GGANPAFWLFVDPDKLAANGLTSEDVMSAVQAQNSIAVGGLVGGPPAAGNQAYTYPILVE
NNGNLTSIDDFNNLILNRSETGNLLKLSDVGEVRYGTNTYSVQAIDKNNHPSLTIGVFQT
PSSNALDVSDAVVKQMAQFASTAPTGVTVNQIYDIGEFIEASVDGVIDALGLAIVLVLII
LFVFLQNWRATLVPSLAIPISLVGAFAFLKAFGFSINQLTLLGLVLATGLVVDDAIVVIE
AVSSNIEKGMKPREAALECMGELFGALLATALVLMAVFVPVAFYPGGIGIIYQQFALTIA
FSIAISAFNALTFSPMLSGLILPKEKPNEPRGFSWIVIGVIVGLAFGHFSADSFGSWTYI
LGLVVGALAGANLVVIFRVFNAGFARLQAFYAKLLALLIKARLLILAGLAAGIALTVFAF
SSLPTAFIPDEDQGYGLGIYQLQNGASLNETKEFASAIAKVLGEEPELENAAIISGSGFN
GSSPDQGLFFFGLKPLSERKKASQSAEAIIQSLNEKLVELSDGMAVAIGPPAVPGFSPQG
GFYFQFNDLSNGAYTFNQLSDMAGELIKEANASGDFQKVYSQFNPSSPAVGLSINRDLMG
ALNIDYQEAMDTIAALSGSNYTGLTYEAGEVRNIYTQGAPDQRETIEDVLGYYVRSRDGE
LVQVSQFATADLSSAPPTINHYNLSRSVLIQGGPAAGKSSGQALSSIQKLFQSLNFNNID
YAFTGLAALQLSAGSASLLVFGLGVLIVYLVLSAQYESYVTPVIILATVPLAMLGALTFL
AIRSIDLNIYAQVGLVTLIGLAAKNGILIVEVAEQKLKQGINATDAVVASAESRLRPILM
TAIAALAGFLPLVVANGAGANSQQSLGTVIFGGLVVATVLSLGVVPPFYVVVKNLEDRLF
GSERPTTDQASTDLPTEA
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttccgacaacttcatcaagcgccctgttctcacaaccgtctgcagcatcttg
atcgtgctggttggtgtgatcgccatcccgaccctgccgatcgcgaaccttcccaacatc
gccaaccccctgattcaggtgtcggctgtgtacggcggtgccaatgccgaagtgaccgag
caggccgtcaccaatccgctggaacagcagatcaacggcgtgcccggcatgagttacatc
acctccaacagcgacatgttggggaacagcacggtcagcgtctatttcgaccagaccacg
gatatcgatatcgaccaggtgaatgtgcagaaccgggtgtctctggcgatgccccagctt
ccggagcaggtctcggccaccggtgtgtccgtggagcagagcaccccatcgatcctgctt
gcctatgaagtgggatcaaccgaagggcagtttgatgcgggctatctcaatggtctgatc
tacgaccagctttattaccccctctcgcgcatcaacggcgttgccaccgtgacggtctat
ggcggcgccaatccagccttctggctgttcgttgatcccgacaaactcgccgccaacggc
ctcacttcagaagacgtgatgtctgccgtacaggcccagaacagcatcgcggttgggggc
ctggtgggaggtccacctgcagcgggaaatcaggcctatacctacccgatcctggtcgag
aacaacggcaacctcacctcgatcgacgatttcaacaacctgatcctcaaccgctcagag
acgggcaatctgctgaagctcagcgatgtgggtgaggtgcgctacggcaccaacacctac
tccgttcaggcgatcgataaaaacaaccacccctccctgacgatcggggtgttccagacg
ccgagcagcaatgcgctggatgtgtccgatgccgtggtgaagcagatggcgcagttcgcc
tccaccgcaccaaccggggtgacggtgaatcagatctacgacatcggcgaattcatcgaa
gcctccgtggatggcgtgatcgacgcactcggactggcaatcgtgctcgttctgatcatc
ctgttcgtcttcctgcagaactggcgcgccacgctggtgcccagcctggcgattccgatc
tcactcgtcggcgcttttgccttcctgaaggccttcggtttctcgatcaaccagctcacc
ttgctgggcctggtgctggccacgggccttgtggtggacgacgcgatcgtggtgatcgaa
gccgtctccagcaacatcgagaagggcatgaagccccgagaggcagctctggaatgcatg
ggtgagctgttcggtgccctgctcgccacggccctggtgctgatggcggtgttcgtgccg
gtggccttctatcccggtggcatcgggatcatctaccagcagttcgccctcacgatcgcc
ttctcgatcgcgatctcagcgttcaacgccctgaccttttcgccgatgctgtcgggcctg
atcctgcccaaggagaagccgaatgaaccgcgcggcttctcatggattgtgatcggcgtg
atcgtggggctggccttcggtcacttcagtgccgattccttcggctcctggacctacatc
ctcgggctggtcgtcggtgccctggccggcgccaatctggttgtgatcttccgggtgttc
aacgccggattcgctcgtcttcaggcgttctacgccaagctcctggcgctgctgatcaag
gcgcggttgctgatcctggcgggactggcggccggcatcgccctcaccgtgttcgccttc
agctccctgccgacagccttcatccctgatgaagatcagggatacggcctgggcatttat
cagctgcagaacggtgcctcactcaacgaaaccaaggagttcgcctcggcaatcgccaag
gtgctcggcgaagagcccgagcttgagaatgccgccatcatcagcggatcgggcttcaac
ggctccagcccggaccagggcctgttcttcttcggcctcaaaccgctctccgaacgcaag
aaggccagccagagtgctgaagccatcatccagagcctcaacgagaagctggtggagctc
agcgacggcatggccgtggccatcgggcctccggcggtcccgggcttctccccccaggga
ggcttctacttccagttcaacgacctgagcaacggcgcctacacgtttaaccagctctcc
gatatggccggtgaactgatcaaggaggcgaatgccagcggcgatttccagaaggtgtac
agccagttcaacccaagttctccggccgttggtctctcgatcaaccgggacctgatgggt
gccctcaacatcgactatcaggaggcgatggacacgattgccgcgctctccggcagcaac
tacaccggcctcacttacgaggccggtgaagtacgcaacatctatacgcagggagcgccg
gatcaacgcgaaaccattgaagacgtactgggctattacgtccgctcccgggatggtgag
ctggtgcaggtgtcccagttcgccacggcggatctcagcagcgcaccccccacgatcaac
cactacaacctctcccggtccgtcctgatccagggtggaccggccgcaggcaagagcagc
ggccaggccctcagctccatccagaaactgttccaatctctcaatttcaacaacatcgac
tacgccttcaccggtctggcagcgctccagctctcagccggcagcgccagcttgctggtg
ttcggtctcggtgtactgatcgtgtatctggtgctctcagcccagtacgagagttacgtc
acgcccgtgatcatcctggccacggtgccgctggcgatgctgggggctctgaccttcctg
gcgattcgctcgatcgatctgaacatctacgcccaggtgggactggtcaccctgatcggt
ctggcggccaagaacggaatcctgattgttgaggtggcggagcagaagctgaagcagggc
ataaacgcgaccgacgcggtggtggcttcggctgaatcgcggctgcggccgatcctgatg
acagccatcgccgcactggccggcttcctgccgctggtggtggccaatggcgccggagct
aacagtcagcagtccctcggcaccgtgatcttcggcggtctggtggtggccacggtgctc
tcccttggtgtggtgccaccgttctatgtggtggtgaaaaacctggaagatcggctgttc
ggaagcgaaagaccaacaaccgatcaagcctccaccgatctgcccactgaggcatga
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