Synechococcus sp. KORDI-100: KR100_05615
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Entry
KR100_05615 CDS
T03344
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
synk
Synechococcus sp. KORDI-100
Pathway
synk00300
Lysine biosynthesis
synk00550
Peptidoglycan biosynthesis
synk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KR100_05615
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KR100_05615
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
synk01011
]
KR100_05615
Enzymes [BR:
synk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KR100_05615
Peptidoglycan biosynthesis and degradation proteins [BR:
synk01011
]
Precursor biosynthesis
Amino acid ligase
KR100_05615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AII42843
UniProt:
A0A076H131
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Position
1051272..1052777
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AA seq
501 aa
AA seq
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MSQALHTVLQEVGLTIPRGLINPTLTDITSDSRSVRTGSLFLGLPGERVDGGRFWSQALD
AGAAAALISPAAAEAAPPGDGDPVLVVPEPVAPLIGEVSAAFWNQPSRQMALIGVTGTNG
KTTTTHLIEHLAGVVGQPTGLFGTLVNRWPGHSVTAQHTTAFADRLQSQLAKAVAAGCRL
AAMEVSSHALAQQRVAGCRFAGAVFTNLTQDHLDYHTSMDAYFEAKASLFAPPLLDTDVP
RAVVNVDDPWGVRLAERLAGRCWRSSLIDSSAELAMVDLEMTGRGVEGRLISPGGEGRFR
SPLLGRFNLMNLLQAVGALLQQNLPLDALLEAISSFGGVPGRMERVLVPGVDAASLPTVL
VDYAHTPDGLDSALTASRPFTDGRLVCVFGCGGDRDRGKRPQMAAIAARLADRVVITSDN
PRTEDPQRILADVQAGLPEGTDHIVEGNRALAIAAAIAEASPRDLVLVAGKGHEDYQILG
TEKVHFDDREQSELALRRRLS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcgctgcacaccgtgctgcaggaggtcggtctgaccattcccagagggttg
atcaatccaacgctgacggacatcaccagcgattccaggagcgtccggacgggaagtctt
ttcctcggcctgccaggcgaacgggtcgatggtggtcgcttctggagccaggccctcgat
gcaggagcggctgctgctctgatcagccccgcagccgcagaagccgccccgcccggcgat
ggcgatccggttctggtggttcccgagcctgtggcgccgttgattggagaggtttcagca
gccttctggaaccagccgagccgtcagatggccctgatcggcgtgaccgggaccaacggc
aagaccaccacaacgcacctgatcgaacacctcgccggggtggtgggacaacccacgggt
ttgttcggcacgttggtgaatcgttggccggggcacagcgtcacggcccagcacaccacg
gcatttgcagaccgtctgcagtcgcagctggcgaaagctgtggccgcgggttgcaggctg
gccgccatggaggtgagctcccacgctctggctcaacagcgtgtggccggatgtcgtttc
gccggcgccgtgttcacgaacctcacccaggaccatctcgactaccacacgtcgatggat
gcctatttcgaagcgaaggcaagcctgtttgctcctccgctgctcgacaccgatgtcccg
agagccgttgtgaatgttgatgacccctggggcgttcggctggcggaacgattggctggt
cgttgctggcgcagttcgctcatcgattcgtccgctgagctggccatggtggatctggag
atgaccggccgcggcgttgaaggacgcctcatcagtcctggcggtgaggggcggttccgc
tcacctctgctgggccgattcaacctgatgaatctgcttcaggcggtgggtgctttgctt
cagcaaaatctgcccctggacgcgctgctggaggcgatcagcagcttcggcggcgttcca
gggcgcatggagcgtgtgctggtgccgggggtggatgctgcctcattgccaacggtgctg
gtggattacgcccacactcccgacggacttgatagtgctctgacggcgtccagacccttc
acagacggtcgtttggtgtgtgtcttcggctgtggtggggatcgcgaccgtggcaagcgt
cctcaaatggctgcgatcgctgcacgcctcgccgatcgggtggtgatcacctccgacaac
ccgagaacggaggacccccagcggattcttgctgacgttcaggccgggctgcctgagggc
accgaccacatcgttgagggcaatcgggctctggccattgcggctgccattgcagaggct
tctccccgggatctcgtgctggtcgccggtaaagggcatgaggactatcagattctcggg
acggagaaggtgcatttcgacgatcgggagcaatcagaactggctctgcgccgacgtttg
tcctga
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