Synechococcus sp. LA31: KJJ24_10085
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Entry
KJJ24_10085 CDS
T10468
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
synl Synechococcus sp. LA31
Pathway
synl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
synl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KJJ24_10085 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synl03400
]
KJJ24_10085 (nth)
Enzymes [BR:
synl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KJJ24_10085 (nth)
DNA repair and recombination proteins [BR:
synl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KJJ24_10085 (nth)
Prokaryotic type
KJJ24_10085 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
DUF3349
Motif
Other DBs
NCBI-ProteinID:
QVV66831
LinkDB
All DBs
Position
complement(1850365..1851018)
Genome browser
AA seq
217 aa
AA seq
DB search
MRQQERAALIMQRLEEQYPITPVPLDHSDPFTLLIAVLLSAQCTDKKVNEVTPALFAAGS
TPQAMAALPEATILGHIRQLGLAKTKARNVRRLAELLLERHGGEVPASFHALEALPGVGH
KTASVVMAQAFGVPAFPVDTHIHRLAQRWGLSSGVSVKRTETDLKRLFPKSAWNKLHLQI
IFYGREFCTARGCDGTCCPLCRELFPKRRSPVILQKP
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgagacagcaggagcgcgccgctctcatcatgcagcggcttgaggagcagtaccccatc
acaccggttccacttgatcacagcgatcccttcacgctgctgattgcggttctgctcagt
gctcagtgcaccgataaaaaggtgaatgaggttacgcctgcgttgtttgctgcagggtcc
acgcctcaggcgatggcggcactgccggaggccacgatcctgggccatatccggcagctt
ggtttggccaaaaccaaggcgcgcaatgtgaggcgcttggctgagttgctactggagcgc
catggcggcgaggttccggccagttttcatgcgttggaagcgttgccaggcgtggggcat
aaaacggcctccgttgtgatggcccaggccttcggagtgccggcctttcccgtggataca
cacatccaccggcttgctcagcgttgggggttgagcagtggagtaagcgtcaagcgtaca
gaaacggatctgaagcgtttgtttccgaagtcagcctggaataagctccatcttcagatc
atcttctatggtcgagagttttgcacagctcgtggttgtgatggtacgtgttgtcctctc
tgtcgcgagttgttcccaaaacgccgaagccctgtgattttgcaaaagccatga
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