Synechococcus sp. NIES-970: NIES970_04020
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Entry
NIES970_04020 CDS
T09762
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
synn
Synechococcus sp. NIES-970
Pathway
synn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIES970_04020 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synn03400
]
NIES970_04020 (nth)
Enzymes [BR:
synn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NIES970_04020 (nth)
DNA repair and recombination proteins [BR:
synn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NIES970_04020 (nth)
Prokaryotic type
NIES970_04020 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
NrS1-1_pol-like_HBD
Motif
Other DBs
NCBI-ProteinID:
BAW95495
LinkDB
All DBs
Position
420183..420836
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AA seq
217 aa
AA seq
DB search
MAIQYPRSKKKRALAVLEKLYELYPDATCSLDYETPVQLMVATILSAQCTDERVNKVTPA
LFARFPDAAAFAGGDLEEIEQLVRSTGFYRNKAKNIQGACQRIMAVFQGEVPQTMEELFT
LPGVARKTANVVLAHAFGICAGVTVDTHVKRLSNRLRLTKSDNPVQIERDLMQLIPQPEW
ENWSIRLIYHGRAVCNARKPRCGDCAIAHLCPSAPKA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcaatatccccgcagcaagaaaaagcgagccttagctgttctcgaaaaactc
tatgaactctaccctgatgccacctgtagtttggactatgaaacgccagtgcaactgatg
gtggcgacgatcctttcagcccaatgtactgacgagcgcgtcaataaagtgacacctgcg
ctgtttgcccgattccctgatgcggcggccttcgcggggggagacctcgaagaaattgaa
cagttagtgcggtcaacggggttctatcgcaacaaagcgaaaaatatccagggagcttgc
caacgcattatggcggttttccaaggggaagtgccccaaaccatggaggagctgttcacg
ttacctggggtagcccggaaaaccgctaatgttgttctcgcccatgcctttggaatttgt
gcgggagtgacggtggatacccatgtgaaacgcttgagtaaccgactgcgcctgacaaaa
tctgacaatccagtgcaaatcgaacgggatttgatgcagctgatcccccaaccggaatgg
gaaaactggtccattcgtctgatttaccatgggcgcgcggtttgtaacgcccggaagccc
cgatgtggtgattgtgcgatcgcccatctttgcccttctgcaccaaaggcttaa
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