Synechococcus sp. NB0720_010: LY254_05770
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Entry
LY254_05770 CDS
T10498
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno01501
beta-Lactam resistance
syno01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LY254_05770
01503 Cationic antimicrobial peptide (CAMP) resistance
LY254_05770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syno02000
]
LY254_05770
01504 Antimicrobial resistance genes [BR:
syno01504
]
LY254_05770
Transporters [BR:
syno02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LY254_05770
Antimicrobial resistance genes [BR:
syno01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LY254_05770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UPH91177
LinkDB
All DBs
Position
complement(1089093..1092356)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSLSDRFIKRPVLTTVCSILIVLVGLIAIPTLPIENLPNIAPPQIQVTANYSGANSLVTE
QAVTNVLEQQINGVPGAAYISSLTTNTGASTVNVFFDEGTDINIDQVNVQNRVSLAMPQL
PSQVSNTGVSVIQTTPSILLAYQVSSSEGQFDRAYLNGLIYEQLYYQLERIPGVAQATLF
GGSNPAFWLFVDPNKLTANQLTADQVVSAVRSQNSVAIGGLVGGPPAGGNQLFTYPILVE
NNGNLVSVDQLNQLIVGRSPQGNLLRLQDVGEATYGFNTFATEGSDINGYPAITVGVYQT
PESNALQVSEAVVNLMDQFRAQVPPGVTVQQIYNVGQFIESAVGGVTDALGLAIVLVLVI
LFLFLQDWRATVVPSLAIPISLVGTFAFMKAFGFSINQLTLLGLVLATGLVVDDAIVVIE
AVAKNLEQGMKPRQAALECMGELIGAIIASSLVLMAVFVPVAFYPGGIGIIYRQFALTIA
FSIAISTFNALTFSPMMAGLILKTEKPPRPEGWRWTVAGLVIGLGFGKFSAASFGPLAYV
VGIAGFGFAGSRLALIFDRFNAFFARLEQGYGRLLHWLIDRRRWILMGLGAGIVTTAIAF
NALPTAFIPEEDQGYGLGIYQLQNGASLSQTQQVGMQIAEVLKQEKNITAGSVISGAGFN
GNSPDQGLFFFGLKPLDERSGSENKAPAIVDRLNAKLSRFSSGLAAASQPPAIPGFSAQG
GFYFQFNDLSNGAYTFTQLDQLAEQLVSQGQASGAYSNLYTQFVPSAPAFGLKIDRSILG
ALNVDFQQAMQTIAILAGGNYSGLTYESGQVRNIYVQAEPAGRQGLENILSYYVRNRDNK
LVQVSEFASSELSSAPPVISHYNLYRTVLIQGVQALGKSSGQALSAIQQQFKALDFNNIG
YAFTGIAALQLSAGSASVLVFGLGVLFVYLVLSAQYESYVTPVIILMTVPLAMLGALAFL
SLRSIDLNIYAQVGLVTLIGLAAKNGILIVEVAEQHLESGMSYGEAAIAAAESRMRPILM
TAIASLAGFFPLVVATTAGANSQQSLGTVIFGGLLVATVLSLGVVPPFYVAIKHLEERWF
GAPTARG
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctcagatcggtttatcaagcgcccggtgctcaccacggtgtgcagcatcttg
attgtgttggtgggactgattgcgattcccaccctgccaatcgagaaccttcccaacatc
gccccaccgcagatccaggtcacggcgaactacagcggggcgaactccctggtgacggag
caggcggtcaccaacgtcctcgagcagcagatcaacggcgtgccgggagcggcctacatc
tcctcgctgacgaccaacaccggtgccagcacggtcaatgtcttctttgacgagggaact
gacatcaacattgaccaggtcaatgtgcagaaccgggtgtccttggcgatgccccaactg
ccatcacaggtgagcaacacgggggtctcggtgatccaaacgaccccctcgatcctgttg
gcttatcaggtctcctcctcggaggggcagttcgatcgcgcctatctcaatggcctgatc
tatgagcagctctactaccagctagagcgcattccaggggttgcccaagcgaccttgttt
ggcgggagtaacccggccttttggctgttcgtcgatccgaacaagctcacggccaaccag
ctgaccgctgatcaggtggtgtcggctgttcgcagtcagaactccgtcgccattggtggc
ctggtcggtggtccaccggcgggggggaatcagctcttcacctatccgatcttggtggag
aacaatggcaacttggtctcggttgatcagctcaaccagttgatcgttggtcgctctccc
cagggcaatctgctgcgcttgcaggacgtgggagaagccacctatggcttcaacaccttt
gcgacggaagggagtgatatcaatggctacccggcgatcaccgtcggcgtttatcagacc
cccgagagcaacgccctgcaggtgagcgaggcggtggtgaacctgatggatcagttccgc
gctcaggttcctccgggggtgactgtgcagcagatctacaacgtcgggcagttcattgag
tccgctgttggaggggtcaccgacgccctgggcctagcgattgtgttggtgctggtgatc
ctctttctgttcctgcaggactggcgcgccacggtggttccgagcctggcgattccgatc
tccttggtgggcacctttgccttcatgaaggcctttggtttttcgatcaatcaactcacc
ttgctgggcttggtcttggccacgggcctggtggtggatgacgccattgtcgtgattgaa
gcggtggccaaaaaccttgagcagggaatgaaaccgcgtcaggccgccctcgaatgcatg
ggcgaattgatcggagccatcattgcttcctcgctggtgctgatggcggtgtttgtgccg
gtggcattttatcccggtgggatcggcatcatctaccgccagttcgccctgacgattgcg
ttctcgatcgcaatctcgacgtttaacgctctgaccttctccccgatgatggcggggctg
atcttgaagactgagaagcctccgcgcccagaaggctggcgttggaccgtggctggtctg
gtgattgggctgggttttggaaaattcagtgccgcctcctttggtcccctggcctatgtc
gtggggattgcggggtttggctttgccggcagtcggctggctctcatctttgatcgcttc
aatgccttttttgctcgcttggagcagggctatgggcgtctcctccactggctgatcgat
cgccggcgttggatcttgatgggtttgggggctgggattgtgaccaccgccattgccttc
aatgccctacccacggccttcatccctgaggaggaccagggctatggcctggggatctac
caacttcagaacggagcgtccctctctcagacccaacaggtgggcatgcagatcgccgag
gtgctcaagcaggagaagaacatcacagcaggcagtgtgatcagtggtgctgggtttaac
ggcaacagccctgatcaaggtctgtttttctttgggctgaagcccctggatgagcgctca
ggctccgaaaacaaagccccggcgattgttgatcgcctgaatgccaagttgtcccgcttc
agcagtggcctggcggcggcttctcaacccccagctatcccagggttttcggcgcaaggg
ggcttttatttccagttcaatgacctcagtaatggtgcctataccttcacccagttggat
caactggcagagcaactggtcagccagggtcaggccagcggcgcctattccaacctctat
acccagtttgttccaagcgctccagcctttggactgaagatcgatcgatcgattctgggt
gcgctgaatgtcgactttcagcaggccatgcagacgatcgccattttggcgggtggtaac
tactccggtctcacctacgagagcggtcaggtgcgcaacatctatgtccaggccgagccc
gctggtcgccagggtttggagaacatcctgagttactacgtgcgcaaccgcgacaacaag
ttggtgcaggtctcggagttcgcctcgtctgaactctccagtgcaccgccggtcatcagc
cactacaacctctaccgaacggtcttgattcagggtgttcaggccttgggtaagagttct
ggtcaggcgctcagtgcgatccaacaacaattcaaggcccttgatttcaacaacatcggc
tatgcctttacggggattgccgctctacagctctcagccggcagcgccagcgtgttggtc
tttggcctgggggtgttgtttgtctatctcgtgctctccgcccagtacgagagctacgtc
accccggtgatcatcctgatgacggtgcccttggcgatgctcggcgccttggccttcctc
tccctgcgctcgattgatctcaatatctatgcccaggtgggcttggtgaccttgattggt
ttggccgcgaaaaacggcatcctgatcgtcgaggtcgccgagcagcatctggaatcgggg
atgtcctacggcgaggctgccattgccgcagctgagtcgaggatgcggccgatcttgatg
acggccatcgcctcattggcgggattcttcccgttggtggtggccaccacggcgggagcc
aacagccagcagtccctcggcaccgtgatctttggtggcctattggtcgccacggtgctg
tcgcttggggtggttccgccgttctatgtcgccatcaaacacttggaggagcgctggttt
ggcgctccaacggcgcggggttag
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