KEGG   Synechococcus sp. PCC 7502: Syn7502_00495
Entry
Syn7502_00495     CDS       T02371                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
synp  Synechococcus sp. PCC 7502
Pathway
synp03030  DNA replication
synp03410  Base excision repair
synp03420  Nucleotide excision repair
synp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:synp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Syn7502_00495
   03410 Base excision repair
    Syn7502_00495
   03420 Nucleotide excision repair
    Syn7502_00495
   03430 Mismatch repair
    Syn7502_00495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:synp03032]
    Syn7502_00495
   03400 DNA repair and recombination proteins [BR:synp03400]
    Syn7502_00495
Enzymes [BR:synp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Syn7502_00495
DNA replication proteins [BR:synp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Syn7502_00495
DNA repair and recombination proteins [BR:synp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Syn7502_00495
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Syn7502_00495
   MMR (mismatch excision repair)
    DNA ligase
     Syn7502_00495
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Syn7502_00495
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 Nlig-Ia DNA_ligase_ZBD PTCB-BRCT BRCT_2 PUB RNA_pol_A_CTD DUF6792
Other DBs
NCBI-ProteinID: AFY72654
UniProt: K9SS89
LinkDB
Position
complement(500323..502362)
AA seq 679 aa
MPNNFDNAEARLRSQELKKILQAASYAYYILDAPTLSDEVYDRLYRELQDLEHTYPELIT
TDSPTQRVGERPATQFTSVQHNIPLYSLENAFTEAELQAWADRCERLLEHSNFEYVCELK
IDGSALALTYEHGLLTRGATRGDGTNGEDITSNVRTIRSIPLRLNLENPPAILEVRGEAF
LGLQSFEQINQIRALSGEPLFANPRNAAAGTLRQLDARKVSDRNLDFFAYTLHLPENTPE
IQAQVQSQSEALEFLQKIGFKVNPNRGIYPDLAGVKSFADRWEQDRFNLPYMTDGVVIKI
NAFNTQSQLGFTQKFPRWAIAWKYPAVEVPTIVKAVTVQVGRTGALTPVAELEPVLLAGT
TVSRATLHNSDRLQTLDLHIGDTVIVRKAGEIIPEVVRVLPELRPSSAPRFTMPIACPEC
DQPVIKPETEAVTRCINPSCPAIVRGVIEHWVSRDAMDIQGIGEKLISQLVEQNLIQAIA
DLYDLTLDQLLTLERTGRKSAEKVLEAINSSKTKPWSRVLYGLGIRHVGSVNAQLLADHF
PSVELLATANSEAIAQIYGIGTEIAQAVQQWFQISSNQNLILRLQNAGLQFQGESTKPPI
NSALSGKTFVITGTLPNLKRDQAKRLIQEAGGKVMESVSKKTDYAIVGADAGSKLEKATA
LGIKCLDEAEFLELLGQPK
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgccaaataattttgataacgctgaagctaggttgcgatcgcaggagctaaaaaaaatt
ctccaagctgccagctatgcttactatattttggatgccccgaccttgagtgatgaggtt
tacgatcgcctctatcgagaactacaggatttagaacatacctatcccgaactaattacc
acggatagccccacccaacgagttggcgaacgtccagctacgcagtttacatcggtacag
cacaatattcccctatatagtctggaaaatgcctttacagaagcagagctgcaggcttgg
gcggatcgatgtgaacgcctattagaacattccaactttgaatatgtgtgtgaactaaaa
atcgatggctcggcgctggcgttaacctacgaacatgggcttttaaccagaggtgccact
agaggtgatggtactaacggcgaagatataacttccaatgtccgcacaattcgttcgatt
cccctacgcttaaatttagaaaatcctcccgccattcttgaagtcagaggtgaagcgttt
ttaggattacagagttttgagcaaattaatcaaatccgagctttatctggcgaaccccta
tttgccaatcctcgaaatgcagcggcaggaacccttagacaattagatgcccgtaaagtt
agcgatcgcaacctagatttttttgcctacaccttacacttaccagaaaatacacctgaa
attcaagctcaagttcaatctcaatcagaggcattagaatttctccaaaaaattggtttc
aaggtcaatcctaatcgaggtatttatccagatttagcaggcgtgaaaagcttcgccgat
cgctgggagcaagatcgatttaacctaccctacatgaccgatggcgtagtgattaagatt
aatgctttcaatacccaatcccagttaggatttacgcaaaagtttccccgttgggcgatc
gcttggaaatatcccgccgtagaagttccgactattgttaaagccgttaccgtccaagtg
gggagaacaggggcattaactccagtcgcagagctagaaccagttttactggcaggaact
accgtctcacgggcaactctccataatagcgatcgcctgcaaaccctagacctccatatt
ggcgataccgtaattgtgcggaaagcaggggaaattattcccgaagttgtgcgagtttta
cccgagttacgtccgagttctgctcccagatttacaatgccgatcgcctgcccagaatgt
gatcaacccgtaattaaacctgaaaccgaagcagttacccgttgtattaatcccagttgt
cccgccattgtgcgtggagtgatcgagcattgggtcagccgagatgcgatggatattcag
gggataggagaaaaattaatcagccaattagtagaacaaaatttaattcaggcgatcgcc
gatctgtacgatttaaccctagatcaacttttaaccctagaacgcacgggcagaaaatcc
gccgaaaaagtacttgaggcaattaatagttctaaaactaaaccttggtcacgggtactg
tatggtttaggcattcggcatgtgggtagcgtcaatgctcaattattagcagatcatttt
ccctcggtagaattattagcaactgccaactctgaggcgatcgcccaaatctatggaatc
ggtacggaaattgcccaagcagtgcagcaatggtttcaaatctccagtaatcaaaattta
attctgcgcctgcaaaatgcgggtttacagtttcaaggggaatctactaaaccacctata
aattcggctttgagcggtaaaacctttgtaattacaggtactctgcccaacctaaaacga
gatcaggcaaaacgcctaattcaagaagcagggggaaaagtaatggaatctgtgagcaaa
aaaacagattatgcgatcgtgggggcagatgcaggctccaagctagaaaaagcgacggct
ttaggtattaaatgtttagatgaagctgagtttttggagttgttagggcagccaaaatag

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