Synechocystis sp. LKSZ1: OLK001_03660
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Entry
OLK001_03660 CDS
T10519
Name
(GenBank) RND multidrug efflux transporter
KO
K18138
multidrug efflux pump
Organism
syns Synechocystis sp. LKSZ1
Pathway
syns01501
beta-Lactam resistance
syns01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
syns00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OLK001_03660
01503 Cationic antimicrobial peptide (CAMP) resistance
OLK001_03660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syns02000
]
OLK001_03660
01504 Antimicrobial resistance genes [BR:
syns01504
]
OLK001_03660
Transporters [BR:
syns02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OLK001_03660
Antimicrobial resistance genes [BR:
syns01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OLK001_03660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BFM38440
LinkDB
All DBs
Position
392044..395172
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AA seq
1042 aa
AA seq
DB search
MFVDFFIKRPVFSSVCALLILLVGLISLVNLPVAQFPEVAPTEIQVTSNYRGASAEVVEK
AVTDILERQINGAQGLRYISSTSSNDGTSSISVIFDRERDKDIAAVDVQNRVSLAEPQLP
DAVKRTGINVNKQSTSLLLGIGLFSPNGKYDNVFLSNYADRYLVDPIKRIKGVGGVRIFG
ERLYAMRLWIDPLRLASQGLTVADISQALEEQNIQVGAGKIGSEPVPKGQEYQIDLRATS
QLTSVEEFENLILKTGENGLIVRLKDVGRAELGAQNYDSFLRYKGKEAVGLGIYQLIDSN
ALEVAGLVKQEMVRLSANFPPDMTYQVAFDTTDFVKESLNEVVHNLVVAVILVVLIILLF
LQDWRTTLIPALTIPLSLIGTFAFVKVFNFSINSLTLFGLTLATGMVVDDAIIVVEQISR
VIQSQGQEAKAAASQAMKELSSAVIATSLVLMAVFVPVAFFPGTTGALYQQFALTIAFSI
TISTFLALTLTPSLCGLLLRQGQHAPPWISWLFDGFNHFLDKLTQAYRQILYGLVKLKLI
ILGLFAALLVFTVWLYMVVPTAFLPDEDQGYFITIIQGPQGVSLQYTSDVIAKVEKELLQ
LPETAATFAVGGFSFSGNSANQGIIFTRLTPWAERKAPNQSVQALIGQMFGKFSQIPEAL
ILPVNPPAIRGLGSFGGFNFQLQDLRVNGDLGSLVQTMGQLLGAANQNPNLQRVFSTFQA
NSPQLLIEVNRNKAKTLGVGVDDIFRTLETALGSAYVNDFILQDRTYRVYLQADQQFRDN
PEDIGKLYVRSQKNQMIPLTNLVQITPTVGAQTINHYNLFRAIAINGSSAPGVSSGKAVE
TMETISKQILPPGFGYEWSGTSLEEIESQGQAPIIFGLGLLFVFLVLAAQYENYVDPVII
MLAVPLAIMGALVAQTLRGFPNDIYCQIGLVMLIGLASKNSILIVEFANQLRAEGLPIVK
AAVEAAQTRLRPILMTALSTLLGIFPLMIATGAGAGSRQTLGTAVFGGMLIATFLSLFLV
PILYIGIKGAMAKLLPPKVEAS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttgatttttttattaagcgcccggttttttcaagcgtttgtgctctgctgatt
ctactggtgggcctgatcagcttggtaaatttgcccgttgcccaattccccgaagtagcc
ccaacggagatccaagtcacctccaactaccgtggggctagtgcggaagtggtggaaaag
gccgtgaccgacattttggaacgacaaattaacggagcacaaggcctgcgctatatttcc
tctaccagtagcaacgacggtacgagcagtattagcgtcattttcgaccgggagcgagat
aaagacattgccgcggtggatgtccaaaaccgcgtttctctagcagagccccaactcccc
gatgcagtgaaacggacggggattaatgtcaataaacaatctaccagtctgctgttaggg
attggcctgtttagccccaatggcaagtacgacaatgttttcctaagtaactacgccgac
cgctatctagtagacccgatcaagcgaattaaaggggtggggggggttcgtatttttggg
gaacgcctctacgccatgcgcctctggattgaccccctgcgcctagccagccagggccta
accgtggccgacattagccaggccctggaagaacaaaatattcaagtgggggccggtaaa
attgggtcagaaccggttcccaagggccaggagtatcagattgatctacgggctactagc
caactcaccagcgtagaagaatttgaaaatctgatcctcaaaactggtgagaatggacta
atcgtgcgccttaaggatgtgggacgagcggaattgggggctcaaaattacgatagtttt
ctgcgttataaaggtaaagaggccgtcggtctgggcatttatcagctgattgatagtaat
gctttagaagtggctggcttggtgaaacaggaaatggtgcgcttatcggctaattttccg
ccggatatgacctaccaagtggcctttgacaccaccgattttgtgaaggaatctctgaat
gaagtagttcataacctggttgtggccgtcattctcgtggtgctaattattctgctgttc
ttgcaggactggcgaacgactctaattccggccctaactattcccctatccctgattggc
acctttgcctttgttaaagttttcaatttctccatcaatagcttgaccctctttggcctg
actctagccacagggatggtagtggatgatgccatcattgtggtggagcagatcagccgt
gtgattcaaagccagggccaagaagccaaagccgcagccagccaggcgatgaaagaatta
tccagtgcggttattgctacttcattagtactaatggcggtgtttgtccccgtggctttt
tttccaggaacgacgggggctctctaccaacaatttgccctgaccattgctttttcgatc
acgatttccaccttcttggccctgaccctgaccccctccctttgtggactactcctgcgg
caagggcaacatgcacccccttggattagttggctgtttgatgggtttaatcatttcctc
gataagctaacccaggcctaccgccaaatcctctacggtctagttaagctcaaactcatt
atccttggcctctttgccgcgttattggtcttcacggtctggctctatatggtagtcccc
accgcctttttacccgacgaagatcaagggtattttattactattattcaagggccccaa
ggtgtctctctccagtacaccagtgatgtcatcgccaaagtggaaaaggaactcctgcag
ttaccagaaacagcggccacctttgctgtgggaggctttagttttagcggtaatagcgcc
aaccagggtattatttttactcgtcttaccccttgggcagaacgcaaggccccaaatcaa
tcagtacaggctctgatcggccagatgtttggcaaattttcccaaattcccgaggccctt
atcttgcccgttaatcccccggccattcgcggcctgggcagttttggtggttttaatttt
caactccaggatctccgggtgaatggcgacctgggttccctggtacagaccatgggccaa
ctgctgggggctgccaatcaaaaccccaatctccagcgggtgtttagtaccttccaagcc
aacagtccccagctgttgatcgaagtcaatcgtaataaagctaaaaccctcggcgtcggc
gtggacgatattttccgaaccttggaaacggccctcggctcagcctacgtcaatgatttt
attctgcaagaccgcacctatcgagtttatctgcaagctgaccaacaattccgtgataat
cctgaagatatcgggaaactttacgttcgcagtcaaaaaaaccaaatgattcccctgacc
aatttggtccaaattacccccaccgtgggggcccaaaccattaaccactacaatctcttc
cgggctattgccatcaacggctcttctgcaccaggcgtaagctccggcaaagccgtcgaa
accatggagacgatcagtaaacaaattctgccaccgggctttggctacgaatggtcgggt
acctctcttgaggaaatcgaatcccagggccaagcgccgattatttttggtctggggtta
ctctttgtttttttagtactggcagctcagtacgagaattacgtcgatccagtcattatt
atgttggcggttcccctggccatcatgggggccttggtggcccaaaccctgcgggggttt
cccaacgatatttattgccagatcggtttggtcatgctgattggcctagccagcaaaaac
tcgatcctgatcgtggaatttgccaaccaactacgagctgagggtttgccgattgtcaaa
gcagcggtggaagctgcccagacacgcctgcgacccattctaatgacggccctttccacc
ctcctagggatttttccgctaatgattgcaacgggggccggggccggcagtcgtcagacc
ctagggacagcggtctttggggggatgttaatcgctacttttctgagcttatttctggtg
cccattctttacattggcatcaaaggggctatggccaaacttctaccgccgaaggtcgaa
gcctcctag
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