Synechococcus sp. SynAce01: BM449_04825 Help Entry BM449_04825       CDS       T08413                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism syny  Synechococcus sp. SynAce01 Pathway syny03030   DNA replication syny03410   Base excision repair syny03420   Nucleotide excision repair syny03430   Mismatch repair Brite KEGG Orthology (KO) [BR:syny00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BM449_04825    03410 Base excision repair     BM449_04825    03420 Nucleotide excision repair     BM449_04825    03430 Mismatch repair     BM449_04825  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:syny03032]     BM449_04825    03400 DNA repair and recombination proteins [BR:syny03400]     BM449_04825 Enzymes [BR:syny01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BM449_04825 DNA replication proteins [BR:syny03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BM449_04825 DNA repair and recombination proteins [BR:syny03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BM449_04825    NER (nucleotide excision repair)     GGR (global genome repair) factors      BM449_04825    MMR (mismatch excision repair)     DNA ligase      BM449_04825   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BM449_04825 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT BRCT_2 zf-tcix TF_Zn_Ribbon Auto_anti-p27 Motif Other DBs NCBI-ProteinID:  APD47712 UniProt:  A0A1J0PA56 LinkDB All DBs Position 943889..945967 Genome browser AA seq 692 aa AA seqDB search MPDPSPQHRAEELHRLLQRAAHAYYVLDAPELEDAVYDRLYRELQEIEALSPELVRADSP TQRVGGPPADGFLAVRHRISLLSLENAFSSEELQAWYGRLLKVLDRPAPLGEAAAALPMV CELKIDGNALALSYERGVLVRAASRGDGESGEEITANVRTIQSVPLRLLLDDPPEWLEVR GEALIPDSTFAAINAERASREEPLFANPRNACAGTLRQLDPAVVAARRLEFFAYTLHLPG DWQPAAGEPSRPRSQWECLSWLAAAGFRVNPNAALCPDLASVEAFFAAWEQQRHQLAYAT DGVVVKLDDLRLQADAGFTQKAPRWAIALKYPAEEAPSQLLHLVAQVGRTGVITPVAEFE PVTLAGTSVSRATLHNADRLVELDLHDGDTVVVRKAGEIIPEVVRVLSELRAPGARRLQL PSTCPECGSTLVREEGEAATRCVNSSCPAILRGALRHWVSKAALDVDGLGGKLIEQLVDQ GLVTSIAALYRLDAALLASLERMGETSALKLAAALEASKQQPWHRQLYGLGIHHVGAVNA KALARQFASAEALGTAAAEQPEAITAVFGIGAEIAESLRQWFATAANLALLAELEAEGIP LAAALGDGAAGEAANRLSGQTFVLTGTLPSLSRSQAQELIEAAGGKVSSSVSKRTSYVVA GAEAGSKLSKAEALGVAVLDEAGLRELLEELS NT seq 2079 nt NT seq  +upstreamnt  +downstreamnt atgcccgatccatccccccagcacagggccgaggaactgcaccggctgctgcaacgcgcc gcccacgcgtactacgtgctcgatgctccggaacttgaagacgcggtttacgaccggctg tatcgggagctgcaggagattgaggcgctaagccccgagctggtgcgtgccgacagcccc acccagcgggtgggcggcccgccggccgacggcttcttggccgtgcgtcaccgcatcagc ctgctcagcctggagaacgccttctcaagcgaagagctgcaggcctggtacgggcggctg ctgaaggtgctcgatcggcccgctcccctcggggaagccgccgcagcgctgccgatggtg tgcgaacttaagatcgacggcaacgccctggccctgagctacgagcgtggcgtgctggtg cgggccgccagccgcggcgacggcgaatccggcgaggagatcaccgccaatgtgcgcaca atccagagcgtgcccctgcgcctgctgctggacgatccgccggagtggctggaggtgcgc ggcgaagccctgatccccgatagcaccttcgcggccatcaacgccgagcgcgccagccgc gaggagccgctgtttgccaacccgcgcaatgcctgcgccggcaccctgcgtcagctcgat ccggccgtggtggcggcacggcgactggagttctttgcctacaccctgcacctgccgggc gactggcagcctgcggccggcgagccctcccggccccgcagccagtgggagtgcctgagc tggctggcggccgccggcttccgggtcaaccccaacgccgcgctctgccccgatctggcg tcggtggaggccttcttcgcggcatgggaacagcagcggcatcagctcgcctacgccacc gatggcgtggtggtgaagctcgatgacctgcgcctgcaggccgatgccggcttcacccag aaggcgccgcgctgggcgatcgccctgaagtaccccgccgaggaggcccccagccagctg cttcatctggtggcccaggtgggccgcaccggcgtgatcacgccggtggctgaattcgag ccggtgactctggccggcaccagcgtgagccgggccacattgcacaacgccgatcgcctg gtcgaactggatctccatgacggcgacacggtggtggtgcgcaaggccggcgagatcatc cccgaggtggtgcgcgtgctgagcgagctgcgcgcgccaggcgccaggcgcctgcagctg ccctccacctgcccggagtgcggctcgaccctggtgcgcgaggagggcgaggccgccacc cgctgcgtgaacagcagctgcccggcgatcctgcgcggcgccctgcgccactgggtgagc aaggcggccctggatgtggatggcctcggcggcaagctgatcgagcagctggtggaccag ggtctggtgacctcgatcgccgctctctaccgcctcgatgccgccctgctcgccagcctg gagcggatgggcgagacctcagccttgaagctggcggcggcccttgaagcctccaagcaa cagccttggcaccgtcagctttatggccttggcatccaccacgtgggagcggtgaacgcc aaagctctggcgcggcagtttgcctccgccgaggccttgggcaccgccgcggctgagcaa ccagaagcgatcaccgccgtcttcggcatcggcgctgaaatcgccgaatccctgcgccaa tggttcgccaccgccgccaacctcgccctgctggcggagctggaggctgaggggatcccc ctggcggcagccctaggcgatggggctgctggggaagccgccaaccgcttgagcggccag accttcgtgctcactggcaccctgcccagcctcagccgcagccaggcccaggagttgatc gaggcggcggggggaaaggtgagcagctcggtgagtaaaagaacgagctacgtggtggct ggcgccgaagccggcagcaagctcagcaaggccgaagccctgggcgtggccgtgctcgat gaggccggcctgcgggagctgctggaggaattgagctga

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