Shewanella youngdeokensis: RGE70_03145
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Entry
RGE70_03145 CDS
T10660
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00270
Cysteine and methionine metabolism
syou00450
Selenocompound metabolism
syou00670
One carbon pool by folate
syou01100
Metabolic pathways
syou01110
Biosynthesis of secondary metabolites
syou01230
Biosynthesis of amino acids
syou04981
Folate transport and metabolism
Module
syou_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RGE70_03145 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RGE70_03145 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RGE70_03145 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RGE70_03145 (metH)
04980 Cobalamin transport and metabolism
RGE70_03145 (metH)
Enzymes [BR:
syou01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
RGE70_03145 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
MtrH
Motif
Other DBs
NCBI-ProteinID:
WOT05840
UniProt:
A0ABZ0JZV7
LinkDB
All DBs
Position
complement(737541..741311)
Genome browser
AA seq
1256 aa
AA seq
DB search
MATRTQTHALNPVPHTQDTATTVLAALTQKLQQGILLLDGAMGTMIQDRKFEEADFRGET
FKDWHCDVQGNNDMLVLTQPAAIKQIHKDYLLAGSDIIETNTFNATRIAMADYDMQEHSA
AINLAGARLAREAANEVEAETGRSCFVAGVLGPTNRTCSISPDVNDPGYRNVSFDELVEA
YIESINALIAGGCDLLMVETIFDTLNAKAALFAIDTVFDTQGFRLPIMISGTITDASGRT
LTGQTTEAFYNSLRHIKPLSIGLNCALGPKELSPYIAELSKIAQCYVSAHPNAGLPNEFG
GYDETPEQMSEIIEDWANEGFLNIIGGCCGSTPEHIRAIHDAVSKHPARKLPNIPVACRL
SGLEPLTIDQNSLFLNVGERTNVTGSAKFLRLIKTGEYEEALSVARDQVENGAQIIDINM
DEGMLDGAETMHKFLNLIASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEG
EDKFIEQATLVKRYGAAAIVMAFDEQGQADTKARKIEICTRAYNVLVDKVGFPPEDIIFD
PNIFAIATGIEEHDNYAVDFIEATAEIKRTLPHAMVSGGVSNVSFSFRGNNPVREAIHAV
FLYHAIQAGMDMGIVNAGQLAIYDDIDPELKEHVEAIVQNLPCTAVDANGEPTNNTDLLL
DIAEKFRGDGSQANKKEDLAWRNKPVNERLAHALVKGITDFIDQDTEEARQQATRPLDVI
EGPLMDGMNIVGDLFGSGKMFLPQVVKSARVMKKSVAYLNPFIELEKKPGQSNGKVLMVT
VKGDVHDIGKNIVGVVLACNGYEVIDLGVMVPVEKIIEVAKAENVDIIGMSGLITPSLDE
MVHNVKSFHKAGLTIPSIIGGATCSKIHTAVKIAPHSPTGAIYIPDASRAVPMVSKLISN
ETRQATIDAAYQEYDIMREKRLSQAKRKTITSIEAARENRCQHDWKNYSPFVPNVLGRQV
FDDYPLTDLVERIDWTPFFRSWELHGHFPRILDDEIVGEEARKLFSDGKAMLKKIIDEKW
LTAKAVIGLFPANTVNHDDIELYTDESRSELELTTHHLRMQIERVGNDNFCLADFVAPKS
SGVADYMGGFAVTTGHGIDKHIARFEADHDDYSAIMVKCLADRLAEAFAERMHERVRKEF
WGYAADEALDNESLIREKYKGIRPAPGYPACPDHTEKGLLWDLLKPDETIGLNITESYAM
FPTAAVSGWYFAHPKSRYFGVTNIGRDQVEDYAARKGMSIEETERWLAPVLDYDPE
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacgtacccaaacacatgccctaaacccagtcccgcatactcaagacactgca
acaacagtgctggcggcactaacccaaaaattacagcaagggatccttctccttgatggt
gcaatgggcaccatgatccaagatcgcaaatttgaagaagccgattttcgcggcgagacc
tttaaagactggcactgcgatgtgcaaggcaacaacgacatgttggtgctaacccagcct
gccgccattaaacagatccataaagactatttactggcaggttccgacatcatcgaaact
aacacctttaacgccactcgtatagccatggccgattacgacatgcaggagcattctgca
gccatcaacttagcgggtgcccgcctagcgcgcgaagccgctaacgaagttgaggccgaa
acgggtcgcagctgctttgttgctggggtactgggtcccaccaaccgtacctgctcgata
agccccgacgtaaatgatcccggctaccgtaacgttagctttgacgaactagttgaagct
tacattgaatcgattaatgcgctcattgctggcggctgtgatctacttatggtcgaaacc
atttttgacacacttaacgccaaagccgcactatttgccattgatactgtgttcgacacc
caaggttttcgcctgccaattatgatatctggcaccattaccgacgcctcgggccgaacg
ttaaccggccaaaccaccgaagccttttataactctttacgccacattaagccgctatcc
atcggccttaactgcgccttgggtcctaaagaactcagtccttatattgctgagctatcg
aaaattgctcaatgttacgtgtctgctcaccctaacgcgggtttgccaaatgaatttggc
ggctacgatgaaacgcccgagcagatgagtgaaatcatcgaagactgggctaacgaaggc
tttttaaacattattggcggttgctgtggtagcacgcctgagcatatccgagcgatacat
gatgcagtaagcaaacacccagcccgtaagctacctaacattcccgtggcgtgccgctta
tcagggcttgaaccgcttaccattgaccaaaactcactgtttttaaatgtcggcgagcgc
accaacgtaacgggttcggccaagtttttacggctaataaaaaccggcgaatatgaagaa
gccctcagcgttgcccgtgatcaagttgaaaacggagcacagatcattgatatcaacatg
gatgaaggcatgctcgacggcgctgaaaccatgcataagtttttaaacttaatcgcctct
gagcctgatatttctcgggtacctatcatgatcgactcctccaaatgggaggtcattgaa
gctgggctaaaatgcatccaaggtaaaggcatcgtaaactctatttcgctcaaagaaggc
gaagacaagtttattgaacaagccacactcgttaagcgttacggcgctgcggccattgtg
atggcatttgacgaacaaggccaagcagacactaaagcacgtaaaatagagatctgtacc
cgcgcctataacgtgctggtcgacaaagtcggctttccgccagaagacattattttcgac
cccaacatttttgcgattgccaccggtattgaagagcacgacaactatgccgtcgatttc
attgaagccaccgccgagataaaacgcacactaccgcacgcgatggtatctggtggggta
tcgaacgtgtcgttctcgttccgaggtaataacccagtacgtgaagccattcatgccgta
tttctttatcatgctattcaagccggtatggacatgggtattgttaacgccggacaactg
gcaatttatgacgacatagacccagagcttaaagagcatgtcgaagctatagtgcaaaac
ttaccttgtactgctgttgacgctaacggtgaaccaaccaacaacaccgaccttttactc
gacatcgctgaaaaattccgcggcgacggatcgcaagccaataaaaaagaagatttagcc
tggcgcaataagccagtaaatgagcgattagcccatgctctcgttaaaggcattaccgac
tttattgaccaagacactgaagaagcccgccagcaagccactcgcccactggatgtgatt
gaaggaccattaatggatggcatgaacattgttggagacctatttggctctggtaaaatg
tttcttccacaggtggtaaaatcggcacgggtgatgaaaaagtccgtggcttaccttaac
ccgtttatcgaacttgaaaaaaaaccaggccagtcaaacggtaaagtactgatggtgacc
gtaaaaggcgacgtacacgatattggtaaaaatattgttggcgtggtactggcgtgtaat
ggctacgaagtcattgatttaggcgtgatggtgccagtggaaaaaattatcgaagtagcc
aaagctgaaaacgtcgacattattggcatgtcaggcctgatcaccccaagccttgatgag
atggtacacaacgttaaatcgttccataaagccggtttaactatcccgtcaattattggt
ggcgcgacctgctctaaaatacataccgccgtaaaaattgcaccgcactcaccaacggga
gcaatctacattcccgacgcctcacgcgcagtgccgatggtatcaaaactgattagcaac
gaaacacgccaagcaacaattgatgcggcctatcaagaatacgacatcatgcgcgagaaa
cgcttatcgcaagctaagcgtaaaaccatcacctccatagaggcagcccgtgaaaaccgc
tgccagcacgactggaaaaactacagcccatttgtacctaacgtacttgggcgccaagtg
tttgatgactacccattaacagacttagtagagcgtattgactggaccccatttttccgt
agctgggagttacacgggcatttcccgcgtattttagatgacgaaatcgtcggtgaagaa
gcgcgtaaactatttagtgacggtaaagcgatgctaaaaaaaatcatcgacgaaaagtgg
ctcaccgctaaagccgtcataggtctgtttccagccaacacggttaaccatgacgacatt
gaactgtacaccgatgagtcgcgcagcgagcttgaactcaccacgcaccacctgcggatg
caaatagagcgtgtcggcaacgacaatttctgcctagctgactttgtcgcaccaaaatcg
tctggcgtggccgactatatgggtggttttgcagtcaccaccgggcatggaatcgacaag
cacattgctcgctttgaagctgaccatgatgactactctgccattatggttaaatgctta
gccgaccggttagccgaagcctttgccgaacggatgcacgaacgcgtgcgtaaagaattt
tggggttacgccgccgacgaagcgctcgataacgagtcacttatacgcgaaaagtacaaa
ggtattcgaccagcgcctggttacccagcgtgcccagaccatacagaaaaaggcttgctg
tgggatctactcaaaccagatgaaaccatcggccttaacatcaccgaaagttacgccatg
ttccctaccgccgcggtatcgggttggtactttgcccaccctaaatcacgctactttggg
gttactaatattggccgcgatcaagttgaagactatgccgcacgtaagggcatgagtatt
gaagaaactgaacgttggttagcacctgtacttgattatgatcctgagtaa
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