Shewanella youngdeokensis: RGE70_04670
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Entry
RGE70_04670 CDS
T10660
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
syou Shewanella youngdeokensis
Pathway
syou01501
beta-Lactam resistance
syou01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGE70_04670
01503 Cationic antimicrobial peptide (CAMP) resistance
RGE70_04670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syou02000
]
RGE70_04670
01504 Antimicrobial resistance genes [BR:
syou01504
]
RGE70_04670
Transporters [BR:
syou02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RGE70_04670
Antimicrobial resistance genes [BR:
syou01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RGE70_04670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
WOT06111
UniProt:
A0ABZ0K0U1
LinkDB
All DBs
Position
complement(1099265..1102363)
Genome browser
AA seq
1032 aa
AA seq
DB search
MWISDVSVKRPVVAIVLSLLLCVFGAVSFSKLAVREMPDVESPVVTVRTTYEGASATIME
SQITTTLESEITGISGIDKIESVTRNGSSRITVTFMLGWDLTEGVSDVRDAVARAQRRLP
DEANDPVVSKDNGTGESSVDVNLISSTMDRTQLTDYAERVLEDRFSLITGVSSIDISGGL
YKVMYVQLQPELMAGRQVTTSDIISVLNQENVETPGGEVRNDTTVMAVRTARLYQTPEDF
DYLVVRRSTDGTPIYLKDVAKVFIGAENESSTFKSNGVANISLGVVAQSDANPLEVAQKI
HKEVALIQQFLPEGTELVVDYDSTVFIDRSIDEVFNTLAITALLVILVLYIFIGQARATL
IPAVTVPVSLISAFIAASTFGFSINLLTLMALILSIGLVVDDAIVVVENIFHHIEKGEPP
LLAAYKGTREVGFAVVATTAVLVMVFLPISFMEGMIGLLFTEFSVMLAVSVIFSSIVALT
LTPVLASKLLKVNVKPNRFNGWIESIFERLELLYRKIVTKAVSLRFAAPIVIIACVLGSG
YLMQQVPSQLAPKEDRGLLYVFIKGADGTSYNRMATNMEIAEAKLLPLLGQGVVKSFSIQ
APAFGGRAGDQTGLVIMQLEDWSERSTTAQQALGLVGNALKGIPDVMVRPILPGFRGGSS
EPIQFVLGGSDYKELLKWATVLEEESLNSPIIESPEIDYKETSPELVVTVDRERAAELGI
SVAEVSETLEVMLGGRSETTFVERGEEYDVYLRGDENSFNNVADLSQIYMRSDKGELISL
DTVTHIEEVASAQRLNHNNKQKSVTIKANIGNGYTLGEALDFLDQKAIEMLPSDISIAYN
GESKDFKENQSSVFLVFALALLVAYLVLAAQFESFINPLVVMFTVPMGVFGGFLGLYLTG
QGLNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGLGIEQAIIDASARRLRPILMTAFT
TLIGAIPLIMSTGAGSESRIAVGTVVFYGMAFATFVTLLVIPAMYRLISAGTHSPGYVEA
QLNQAIAAQQTK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtggatttctgatgtctctgtcaaacggcctgtcgttgcaatagtattaagtttactg
ctatgtgtctttggcgcagtctcttttagcaaactcgcagtacgcgaaatgcctgacgtt
gaaagcccagttgttacggtcaggacaacctatgaaggcgcctcggcgactatcatggaa
agccaaataacaaccacgctagaaagtgaaattaccggtattagcggcattgataaaatt
gaatctgtcacacgtaacggctccagccgtatcactgtgaccttcatgttaggctgggat
ctaaccgagggtgtcagtgatgtgcgtgatgctgttgcccgtgctcaacgccggcttccc
gacgaggcaaatgaccccgtagtgtcaaaagacaatggtactggagaatcttcagttgac
gttaatctgatctcttcgaccatggacagaacacaactcacggattacgccgaacgggta
ttagaagaccgctttagtcttatcactggtgtgagtagtatcgatatttctggtggctta
tataaagtcatgtacgtgcagttacaacccgaactgatggccggtcgacaagttacaact
agcgatatcattagcgtactaaatcaagaaaatgtcgaaacccctggcggagaagtacgt
aacgacaccacggtgatggcggtaagaacagctaggctctaccagacacccgaagatttt
gactacctagtcgtgcgcagatcaactgacggcactcctatatatttaaaagatgtagcc
aaagtatttattggcgctgagaatgaaagctcaacctttaaaagtaatggcgtcgcgaat
atcagtttaggtgtggtagcacagtcagatgccaacccgttagaagtggcacaaaaaatt
cataaagaagtcgctcttattcaacaattcttacctgaaggcacagagttagttgttgac
tacgattcaacagtgtttatcgaccgctcaattgatgaagtgtttaacacgttagcgatt
actgctttattagtaattctagtactgtatatttttatcggtcaggcccgtgctaccttg
atcccagccgtcaccgttccggtatcattaatatcagcgtttattgccgctagtaccttt
gggttttctattaacctactgactttaatggcgctaattttatcaattggattagtcgtt
gatgacgccattgtcgtggttgaaaatatttttcatcatattgaaaagggcgaaccacca
ctgcttgctgcctataaaggcacccgagaagttggttttgccgttgtcgccactactgcg
gtgttggtgatggtgttcctccccatctccttcatggaaggcatgattggcttactattc
actgagttttcggtgatgttagccgtttcagttattttctcgtcgattgtagccttaact
ttaacgccggttctagccagtaaactgttaaaggtaaatgtaaaacctaaccgtttcaac
gggtggattgagtctatcttcgagcgcctagagctgctctaccgtaaaatagtcaccaag
gcagtgtcattgaggtttgccgcgcctatcgtcattattgcttgtgtgctcggcagtggt
tacttaatgcagcaagtgccttcacaactcgccccgaaagaggatagaggcttactctat
gtctttattaaaggagcagatggcaccagctataaccgtatggcaacgaatatggaaatt
gctgaagcgaagttattgccgctattgggccaaggtgtggtgaaatctttcagcattcag
gcccctgcatttggtggccgagcaggtgaccaaactggcttagttatcatgcaactagaa
gattggagcgaacgtagtaccactgcccagcaggctcttggccttgttggcaatgcactt
aaaggcattcctgatgtgatggttcgccccattctacctggctttagaggtggctcaagt
gaacctattcaatttgttcttggaggctctgactacaaagagctattaaaatgggctacc
gtacttgaagaagaatcgctcaatagcccaataattgaaagcccagaaattgattacaaa
gaaacttcaccggaactagtggtcaccgttgaccgtgagcgcgcagcagaactggggatt
agcgtagcagaagtctcagaaacccttgaggttatgctaggcgggcgcagcgaaaccact
tttgttgaacgaggtgaagagtatgatgtatatctgcgcggtgacgaaaacagctttaat
aatgttgccgacttaagccagatctacatgcgctcagacaaaggtgagcttatcagtctc
gacacagtcacccacattgaagaggttgcgtctgcccagcggcttaaccacaacaacaag
caaaagtctgtcaccattaaagccaatatcggtaatggttatactttgggtgaggcatta
gactttttagatcaaaaagccattgagatgctgcccagtgatatttcgattgcatataat
ggtgaatccaaggacttcaaagaaaaccaaagtagcgtttttctagtatttgcattagct
ctactggtggcttatttagtcctagcagcccaattcgaaagctttattaaccctttagtt
gtcatgtttactgtacctatgggagtgtttggtggcttcttagggttatatttaactggg
caagggctgaacatttatagccagataggcatgattatgctgataggcatggttacaaag
aacggtattttgattgtcgaatttgccaaccaacttagagatagaggtttgggtattgag
caagcaattatcgatgcgtcagcaagacgtttacgccctattctaatgacggcttttacc
actttgattggtgcgatcccattaatcatgtcaaccggtgctggctcagaaagtcgaatt
gcggttggtaccgtcgtattttacggtatggcttttgccacctttgtaacactattagtg
atcccggcaatgtaccggttgatctctgcgggcactcactcgccaggttacgttgaggcg
cagctaaaccaagcaatcgcggcgcagcaaactaagtag
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