Shewanella youngdeokensis: RGE70_04675
Help
Entry
RGE70_04675 CDS
T10660
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
syou Shewanella youngdeokensis
Pathway
syou01501
beta-Lactam resistance
syou01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGE70_04675
01503 Cationic antimicrobial peptide (CAMP) resistance
RGE70_04675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
syou03036
]
RGE70_04675
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syou02000
]
RGE70_04675
01504 Antimicrobial resistance genes [BR:
syou01504
]
RGE70_04675
Chromosome and associated proteins [BR:
syou03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RGE70_04675
Transporters [BR:
syou02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RGE70_04675
Antimicrobial resistance genes [BR:
syou01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RGE70_04675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
DUF4131
Motif
Other DBs
NCBI-ProteinID:
WOT06112
LinkDB
All DBs
Position
complement(1102364..1103458)
Genome browser
AA seq
364 aa
AA seq
DB search
MKSFRILLPLLIAATCALAVSSVSYANKPGPSGKAVRTVPVVTYVVEQHELAQSLSLVGN
LDAEKSVLIAPQIAGKIDSIDVKSTQAVTKGQVLIHLDDAKAQAAVAEATSYLADEKRKL
AEFLKLIDRSAITQTEIDAQQASVDMAVAKLSAAQAELDYHFLTAPFSGTAGLIDYSQGK
MVTAGTELLTLDDLSYMRLDLQVPENYLSMLSTGMSVNATSRAWPDTSFTGEVTAIDPRI
NHDTLSLRVRVKFANPQQQLKPGMMMSATLVFPSVSEPVIPVQALEYSGTNRFVYIVGED
QIAKRTKVTLGARIDNQVLVSDGINIGDRVVVQGLVNMRDGLKIDDITASQTAVNSAQQA
KGNL
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgtttcgcattcttcttcccttattaatcgctgccacctgtgcactggcggtt
agcagcgtatcttacgccaacaaacctggccctagcggaaaagctgttcgcacagttcca
gttgttacctatgtagtagagcaacatgaactagcccaatcattgtcacttgttggcaat
cttgatgctgaaaagtcagtgctaatcgcaccgcaaattgcaggcaagatagattcaatt
gatgttaaatcaacccaagcggtcacaaaaggccaagtgttaattcaccttgatgatgcc
aaagcacaggccgcagtggcagaggcaacgtcctaccttgccgatgaaaagcgcaaactg
gctgagtttttaaagctaattgatcgcagcgccattacccaaacagaaatagatgcccag
caagccagtgttgatatggctgtcgctaagctgtcggcggcgcaagctgagcttgactac
catttccttacagcacctttttcaggcactgcgggcttaatcgactatagccaaggtaaa
atggtcacagcaggcactgaactgctcacacttgatgacctatcctacatgcgtttagac
ctacaagtaccagaaaattacttatcaatgctaagcactggaatgagcgttaacgcaact
agccgcgcctggcccgacacttcatttacaggtgaagtgactgccattgaccctagaatc
aatcacgacacactcagtttacgcgttagggttaaatttgctaacccacagcaacagctc
aaaccaggcatgatgatgtctgccacactggttttcccttctgtatctgagccagtgatc
cctgtgcaagctcttgaatattcaggtaccaaccgttttgtgtatatcgtaggagaagac
caaattgccaagcgaaccaaggttaccctaggcgctcgtattgataaccaagtattagtt
tctgatggcataaatattggcgacagagtcgtagtacaagggcttgttaatatgcgcgac
ggcttgaaaattgatgatataacagcttctcaaacagcggttaatagcgcgcaacaagca
aaaggaaatctataa
DBGET
integrated database retrieval system
