Shewanella youngdeokensis: RGE70_11070
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Entry
RGE70_11070 CDS
T10660
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
syou Shewanella youngdeokensis
Pathway
syou01501
beta-Lactam resistance
syou01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGE70_11070
01503 Cationic antimicrobial peptide (CAMP) resistance
RGE70_11070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
syou03036
]
RGE70_11070
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syou02000
]
RGE70_11070
01504 Antimicrobial resistance genes [BR:
syou01504
]
RGE70_11070
Chromosome and associated proteins [BR:
syou03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RGE70_11070
Transporters [BR:
syou02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RGE70_11070
Antimicrobial resistance genes [BR:
syou01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RGE70_11070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
Beta-barrel_RND_2
YknX_C
BSH_RND
RND-MFP_C
BSH_CusB
CzcB_C
Biotin_lipoyl
BSH_YknX
Beta-barrel_RND
AAA_assoc_C
Peptidase_M23
BSH_YhbJ
DUF2118
Herpes_U47
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
WOT07009
UniProt:
A0ABZ0K392
LinkDB
All DBs
Position
2590965..2591981
Genome browser
AA seq
338 aa
AA seq
DB search
MAVLLSACGVEEEVKEEDKYAVPVETTMVVQGDVSSFYSTTATLEAPQEAHVVTRVAGLI
QSIKVEEGDRVTKGQLLAVIDSKRQKFELDRSQAEVEIIEQELNRLKKINNQEFFSADSM
AKLEYNLQAAMAKRDLAALYVQESMIRSPIEGVVATRFIKSGNMAKEFDELFYIVNQDEL
YGIVHLPEQQLQHLRLGQDAQISASKHSQEITHAKVLRISPIVDAQSGTFKVTLSVPNQK
ATLKAGMFTRVQLRYDTHKNVITVPYNALINQDNEFALYIIDGSNASRRTVEVGYREGDT
VEVLAGIVTGDQIVVRGHQNLKDQSLVEVIRSLDVASK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggctgttttactgagtgcttgtggtgtagaagaagaggtcaaagaagaagataaatat
gcagtcccagtcgagacaacaatggtggtacaaggcgacgtatcctctttttacagtacc
actgcaacactcgaagcaccacaagaggcacatgtcgttacccgcgtagctggactgatt
caatcaatcaaagttgaggaaggtgatagagtcaccaagggacaattattggccgttatt
gattcgaaaagacagaagttcgaattagatcgttcacaagcagaagttgaaattattgag
caagaactcaaccgtctaaaaaagatcaacaatcaagagtttttcagtgctgactccatg
gccaagctcgaatataacctgcaagccgcaatggccaaacgagacttagccgcgttatac
gttcaagaaagcatgatccgctcgcctattgaaggtgtagttgcaactcggtttataaag
tcaggtaatatggccaaagaatttgatgaacttttctatatcgttaaccaagatgagttg
tacggaatcgttcacctaccagagcaacaattacagcaccttcgcttaggtcaagatgcg
caaatttccgccagcaaacactcccaagagatcactcacgctaaagtgttacggataagc
cccattgtcgacgcacaaagcggcacttttaaagtaacactatcggtaccgaatcaaaaa
gccaccttaaaagctggaatgtttactcgggtacaacttaggtacgatacccacaaaaac
gtaataacggtgccttataatgcccttattaatcaagataatgaatttgcgctttatatt
attgacggcagcaacgctagtcgtcgtaccgtagaggtaggataccgagaaggtgatacc
gtagaagtactcgctggcattgtcaccggagatcaaattgttgttcgtggacatcaaaat
ctaaaagatcagtcactcgttgaagtgatccgttctttagatgttgcatcaaaatag
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