Shewanella youngdeokensis: RGE70_11075
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Entry
RGE70_11075 CDS
T10660
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
syou Shewanella youngdeokensis
Pathway
syou01501
beta-Lactam resistance
syou01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGE70_11075
01503 Cationic antimicrobial peptide (CAMP) resistance
RGE70_11075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syou02000
]
RGE70_11075
01504 Antimicrobial resistance genes [BR:
syou01504
]
RGE70_11075
Transporters [BR:
syou02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RGE70_11075
Antimicrobial resistance genes [BR:
syou01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RGE70_11075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
WOT03886
LinkDB
All DBs
Position
2591996..2595316
Genome browser
AA seq
1106 aa
AA seq
DB search
MSIIKTSVNRPVTVWMFMLAIILFGMVGFSRLAVKLLPDLSYPTMTIRTQYVGAAPVEVE
QLVSKPIEEAAGIVKGLRKINSISRSGTSDVVLEFEWGTDMDMASLDVREKLDTIELPLD
IQKPLLLRFNPNLDPIVRLALSVPNTSTGLRSTASNNDLKQMRTYADEELKRQLESLSGV
AAVRLSGGLQQEVHIQLNQQKLTQLNLSAELIRTRIAAENINLSAGKVIQGDKEYLVRTL
NQFNSLEELGQIVIYRDAQTLVRLFEVAKIIDAHKERNDITRIGDQESIELAIYKEGDAN
TVAVARKIAAALDNLNKNSHKGELKVIYDQSEFIESAVSEVTSAALIGSLLSMLVIYLFL
RDIIPTLIISISIPFSIIATFNMMYFADISLNIMSLGGIALAVGLLVDNAIVVLENIDRC
KSMGMNKINAAVTGTKEVAGAIFASTLTTLAVFIPLVFVDGVAGALFSDQALTVTFALLA
SLFVALTTIPMLASREGFKALPPQLSKTEKAKPDTKIAKLKHYSAAVISFPFVLLFNYLP
SALLTLLLVLGHTLAWGAGLIMQPISGVFNWFYTLLEKGYHQLLAMALNFKVLTLTIAVT
ITAAAALLAPRLGMELIPPMNQGEFYVEVLLPPGTEVSETDNVLRKLALSIKDRKDVKHA
YSQAGSGGLMTSDTSRGGENWGRLQVVLANHDAYDAVTAQLRTTAMRLPELEAKIQHPEL
FSFKTPLEIELVGYNLAQLKSTADALVDALSGSERFADVNTSLRDGQPEISIRFDHQRLA
SLGMDAPTVANRIAQRIGGTVASQYTVRDRKVDILVRSELEERNQVSDIDAMIINPNSPH
PISLSAVADVTLKLGPSAINRVSQQRVAIVSANLAHGDLNDAVITAREILAQQTLPASIQ
ARFGGQNEEMEHSFRSLQIALVLAVFLVYLVMASQFESLLHPLLILIAVPMAVGGSIFGL
YITQTHLSVVVFIGLIMLAGIVVNNAIVLVDRINQLRQSGQNKLTAITNAAHSRLRPIIM
TTMTTALGLSPMALGLGDGSEVRAPMAITVIFGLSLSTLLTLVVIPVLYALFDRKDFEKN
HQHGTKQLTRSTAQGFDTASTDGDKT
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattatcaaaacctcggttaaccgcccggttaccgtgtggatgtttatgttagcc
attatattatttggcatggtaggtttttcacgcctagcagtaaaactattacccgaccta
agctatccaacgatgactattcgtacccagtatgtcggggcggcgccggttgaagttgag
caattggtgtcaaaacccattgaagaagcggcggggatcgtaaaggggttacgcaaaatt
aactctatttctcgttctggaacctcagatgttgtacttgagtttgaatggggtaccgat
atggatatggctagcctagatgtccgtgaaaaactcgataccattgagttaccactggat
atacaaaagccactattacttagatttaaccccaacttagacccaattgtacgcttagca
ttgtctgtcccgaacactagcactgggctcagaagtactgcgagtaacaatgatctaaaa
cagatgcgtacctatgccgatgaagagttgaaacgccagcttgaatcattatctggcgtt
gcagcagtcagactttcaggcggattacagcaagaagtgcacattcagcttaatcagcaa
aaacttacccagctaaacctcagtgctgagttaatccgtacacgcatagcggccgagaac
attaacctgtctgcaggtaaagtgatccaaggcgacaaagagtatttagtccgcaccctt
aatcaattcaattcattagaagagcttgggcaaatcgtcatctatcgtgatgcacaaacc
ttggtcagactgtttgaggtcgcgaaaattatcgatgcccataaagagcgcaacgacata
acccgcattggtgatcaagaatccattgaactggccatttataaagagggagatgccaac
acagtagcagtcgcacgtaaaatagccgcggcacttgataacctcaataaaaacagtcat
aagggcgagctcaaagttatttatgatcaatcagaatttattgaaagtgctgttagtgaa
gtgacatcagccgcactaatcggtagtttactgtcgatgttagttatctacttattttta
cgcgacattattccaaccctgattatctctatttcaatcccgttttcgataatagcaaca
tttaacatgatgtattttgccgatattagccttaatatcatgtctttaggggggatagcc
ttagcggtggggctactggtcgacaacgccattgttgtgctagaaaatatcgaccgttgc
aagtcaatgggcatgaataaaattaacgctgcagtgactggcactaaagaggttgcgggc
gcgattttcgcttcaacgctcacgaccttagctgtatttatacccttggtatttgttgac
ggcgtggccggagcattattttctgatcaagccctgaccgtcacatttgccctattagcc
tctttatttgttgcgctaacaaccatcccaatgcttgcctcaagagaaggatttaaagct
ttaccaccacaattatcaaagacagaaaaagccaaaccagatacaaaaatagctaagctt
aaacactatagtgccgccgtcatttcattcccttttgtacttttatttaactatctaccc
agtgccctactcacgctcttattagtgctaggtcacacgttggcttggggggctggttta
attatgcaacctataagtggagtgtttaactggttctacactctattagaaaaaggttat
caccagctattggctatggcgctaaattttaaggtattaactttaaccattgcggtgacc
atcacagcggccgcagcgctgctagctccgaggcttggtatggaactgatcccgccgatg
aatcaaggtgagttttatgttgaagtattgctcccgcctggcactgaagtttctgaaact
gacaatgttctgcgtaaattagcactatcaattaaagaccgtaaggacgtaaaacacgcc
tacagccaagctggcagtggtggactgatgacctcagacacctctcgtggcggtgaaaac
tggggacgcttacaagtcgtccttgccaatcacgacgcttatgatgcagtcacagcacaa
ttacgtacaaccgcaatgcggctcccagagcttgaggccaaaattcaacatccagagttg
tttagctttaagaccccattagaaatagagctcgtaggttacaatctggctcaactaaaa
agtacagctgatgctctggtcgatgcattgtctggctcagagcgttttgccgacgtcaat
actagcctacgcgatggacagccagaaataagcattcgatttgaccaccagcgtcttgca
tctttaggaatggatgcccctacagttgccaaccgaattgcacagcgcattggcggcacc
gtggcgagtcaatatacggtgcgtgaccgtaaggttgatattctagtacgcagtgaactt
gaagagcgtaatcaagttagtgacatcgacgccatgattattaaccccaacagccctcac
ccaatttcacttagcgctgttgctgatgtcacgttaaaactgggtccctctgcgattaac
agagttagtcagcagcgtgttgccattgtgtcggcaaacctagcccacggcgatctcaat
gatgccgtcattaccgcgcgtgaaattttagcccagcaaacacttccagcgtcaattcaa
gcacgttttggtggccaaaatgaagaaatggaacattcatttagatctctacaaattgcg
ttagtgttagcggtgtttttggtgtatttggtcatggccagtcagtttgagtcgttgctg
caccctttattgatcctcattgcagtgccaatggctgtcggcggcagtatttttgggctc
tacattacccaaacacatttgagtgtagtggtgtttataggtttaattatgctcgccggt
attgtggtaaataacgccattgtattggtcgaccgtattaaccaattacgccagtctgga
caaaataaacttaccgcaataaccaatgcagctcactctcggctacgcccaatcataatg
acaaccatgaccacagctctcggtttatcaccaatggctttagggctaggcgatggcagt
gaagttcgggctccaatggccattaccgttatttttggtctatcgctgtcaacattactg
accttagttgttattcccgttctctatgcgctgtttgaccgcaaagattttgaaaaaaac
catcaacatggtacgaagcagctaacccgctctacagcacagggcttcgatacagcttct
actgatggagacaaaacatga
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