Shewanella youngdeokensis: RGE70_14660
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Entry
RGE70_14660 CDS
T10660
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00020
Citrate cycle (TCA cycle)
syou00270
Cysteine and methionine metabolism
syou00566
Sulfoquinovose metabolism
syou00620
Pyruvate metabolism
syou00630
Glyoxylate and dicarboxylate metabolism
syou00680
Methane metabolism
syou00710
Carbon fixation by Calvin cycle
syou00720
Other carbon fixation pathways
syou01100
Metabolic pathways
syou01110
Biosynthesis of secondary metabolites
syou01120
Microbial metabolism in diverse environments
syou01200
Carbon metabolism
Module
syou_M00009
Citrate cycle (TCA cycle, Krebs cycle)
syou_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
syou_M00012
Glyoxylate cycle
syou_M00168
CAM (Crassulacean acid metabolism), dark
syou_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RGE70_14660 (mdh)
00620 Pyruvate metabolism
RGE70_14660 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
RGE70_14660 (mdh)
00566 Sulfoquinovose metabolism
RGE70_14660 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RGE70_14660 (mdh)
00720 Other carbon fixation pathways
RGE70_14660 (mdh)
00680 Methane metabolism
RGE70_14660 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RGE70_14660 (mdh)
Enzymes [BR:
syou01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 (S)-malate dehydrogenase (NAD+, oxaloacetate-forming)
RGE70_14660 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
WOT04554
UniProt:
A0ABZ0JXQ6
LinkDB
All DBs
Position
complement(3417011..3417946)
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AA seq
311 aa
AA seq
DB search
MKVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEVQGFAG
KDPSAALDGADVVLISAGVARKPGMDRSDLFNINAGIVKNLVEQCAATCPKALIGIITNP
VNTTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSETFVAEAKGLNVADVKVNVIGGHSGV
TILPLLSQVEGVNFTDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVR
GLQGDANVVECAYVDGGSEHAEFFAQPILLGKNGVEEVLAYGDVSAFEANARDEMLATLK
ADIELGINFVK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgctgtacttggtgctgctggcggaattggtcaggcacttgccctactatta
aaaactcaactacctgcgggttctaaattatcgctttatgatatcgctcctgttacacca
ggtgtcgctgttgacttaagccatattccaacagctgtcgaagtgcaagggtttgctggt
aaagatccgtctgctgcactggatggagccgatgttgtgcttatttctgcaggtgttgcc
cgtaagcctggcatggatcgctcagatctatttaacattaatgctggtattgttaagaat
ctagtcgagcagtgtgctgcgacttgccctaaggctctcatagggatcattactaaccct
gtgaacacaacggttgctattgctgctgaagtactgaaaaaagcgggtgtatacgataaa
aaccgtttgtttggtgtaacgacgcttgatgttatccgttctgaaacttttgttgctgaa
gcaaaaggtttgaacgttgctgacgtaaaagtgaatgttattggtggtcatagtggtgtg
actattctacctctgctttctcaagttgaaggcgttaactttacagatgaagaagttgca
gcattaacgactcgtatccaaaatgcaggtaccgaggtggttgaagctaaagcaggtgga
ggtagtgcaacattgtcgatggggcaagcggcttgtcgttttggtctttctcttgttcgt
ggtctacaaggtgatgctaacgttgttgagtgtgcttatgttgatggtggcagtgagcat
gcagaattttttgctcagcctatcttactgggtaaaaatggcgttgaagaagtacttgct
tatggtgatgttagtgcgtttgaagccaatgcccgcgacgaaatgttagcgacattgaaa
gctgatattgaacttggtattaactttgttaagtga
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