Synechococcus sp. RCC307: SynRCC307_0399
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Entry
SynRCC307_0399 CDS
T00523
Name
(GenBank) Multidrug efflux transporter, Hydrophobe/Amphiphile Efflux-1 (HAE1) family (2.A.6.2.), RND superfamily
KO
K18138
multidrug efflux pump
Organism
syr
Synechococcus sp. RCC307
Pathway
syr01501
beta-Lactam resistance
syr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SynRCC307_0399
01503 Cationic antimicrobial peptide (CAMP) resistance
SynRCC307_0399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syr02000
]
SynRCC307_0399
01504 Antimicrobial resistance genes [BR:
syr01504
]
SynRCC307_0399
Transporters [BR:
syr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SynRCC307_0399
Antimicrobial resistance genes [BR:
syr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SynRCC307_0399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Mycobacteriophage_TM
Motif
Other DBs
NCBI-ProteinID:
CAK27302
LinkDB
All DBs
Position
378546..381839
Genome browser
AA seq
1097 aa
AA seq
DB search
MSLSDTFIRRPVLSTVCSILILMAGLISLPLLPIENLPNIAPPTVQVSANLPGADAVTVE
SAVTGPLEEQINGAPGMDYITSSSTSEGSSQISVYFQANTNADIDQVNVLNRVQTATPQL
PQQVSAQGITVQQTSSSILLVYNLTSTEGQYDASYLNGLYQLNLAYPLARAQGVGQVNVY
GASNPAYRLWVDPEKLTRFNLSVMDVIDALEAQNQIVVGGTIGGPPAPQGTTTTFPILVD
GNLETVQEFENLILARGGAGQATARGPDGSLIRLGDVGRAEYAFQNFNTAGINGITGHPC
IGFGVVQLPGSNAISTAKAVEKVLDQFRSTLPPGVQLEKVFDQTDFINASIYGALDALRD
AVVLVLLIIFLFLQDWKVTMVPALALPIALLGALVFVKVFGFSINELTLLGIILATGLVV
DDAIVVVEAVAARIEAGDKPFAAASNAMKELTGAILATALVLMAVFVPVTFFPGATGVIY
RQFALTIVFSIIVSTFNAISGKPLQSALLLGGGKTEVGGRRWLWIGAIFGGVYGFLFGGV
LWLLLFAGLGALIGGNLKSIFQRFNQGFDRLARAYATLVAQAIRFRRILVSGLLGGVVLT
ALAFLTIPTGFVPTEDQGYGLGIIQLPPQASLEATMEVADQARTILAKQPEVVSGEFIGG
AGFNGGSLNQGLFFFGLKPIDERTKKSQSAQAIIKDLNQQFQSIKGGLVLAQSPPAVPGF
SAQGGLSFQFNDLSNGGYSFTDLREMADELIAKAKSTGDYFNLYSQFVSDAPVWRLEPDR
DRMASLNVNFSDAMQGLEAIYGGSFVNQTYEGGQYRQVYVQAEGSQRAVIESLDNLYVNS
VSGDQIPVSELVTVKLDSAPPIINHYDLYRTVLIQGVNAVGKSSGQAIDTLQSTFKQMNF
ANIGMAWSALSRSEVAAGSLAALVFALGLVVVYLVLSAQYGSYIDPLVILMTVPLAILGA
LIFLVLRGQVNNVYAQVGLVTLIGLAAKNGILIVDMANQRMEAGMDVIEAASSAAQSRLR
PILMTAAAALSGFFPLVVASGAGALSQRSIGAVIFGGLLVATVLSLFVVPAFYVLMKKLE
ANWFPASHEQQDPLPQP
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttcggacactttcattcgtcgcccggtgcttagcaccgtgtgcagcatcttg
atcctgatggccgggctgatttccctgccgctgctgccgatcgaaaacctgccaaacatc
gcgccgcccacggttcaggtgtcggccaacctgcccggcgctgatgcggtcacggttgaa
agcgcagtgactggtccccttgaggagcagatcaatggtgccccagggatggactacatc
acctccagtagcaccagcgaaggcagcagtcagatcagtgtctatttccaggcgaatacg
aatgccgatatcgatcaggtcaatgtgctcaacagggttcagacggctactccccagctg
ccgcaacaggtcagtgcgcaggggatcacggttcagcagacctccagcagcatcctgctc
gtctacaacctcacctccacagagggccaatacgacgctagctatctcaatggcctgtac
cagctgaacctcgcctatcccctcgcacgggctcagggcgttggccaggtgaatgtctat
ggagcttctaatccggcttaccgcctatgggttgatccagagaagctgacgcgtttcaac
ctctcggtgatggatgtcatcgatgccctggaggctcaaaaccagatcgtggtcggcggc
acgatcggtggtccaccagccccgcagggaaccaccaccaccttcccgatcctggtcgac
ggcaatctcgagacggttcaagagttcgagaacttgatccttgcccgtggtggcgctggt
caagccactgcaagaggccctgatggcagcctgattcgcctgggtgatgtgggccgggcg
gaatacgccttccagaacttcaacaccgccggcatcaatggcatcaccggccatccctgc
atcggctttggggtggtacagctgccggggagcaatgccatctccacagccaaggcagta
gagaaagtgctggatcagttccgcagcaccctgcccccaggggtgcaactcgagaaggtc
tttgatcagaccgacttcattaacgcgtccatctatggagcgcttgatgcactccgtgat
gccgtggtgctggtcctgctcatcatcttcctgttcttgcaggattggaaagtcacgatg
gtgccagcgttggcgctgccaattgccctgttgggtgccttggtgttcgtcaaggtgttt
ggcttttccattaacgagctcaccttgctggggatcatcctggcaacgggcttggtggtg
gatgacgccatcgttgtggtggaggcagtggcggctcgcattgaagctggcgacaagccc
ttcgcggctgcctccaatgcgatgaaagagctgaccggagccattctcgccaccgccttg
gtgctgatggctgtgtttgtaccggtgaccttcttccctggagcaactggcgtgatttat
cgccagttcgccttaacgatcgtgttctcgatcatcgtcagcaccttcaacgccatctcc
ggtaagccgttgcaatcagctctgctactcggtggaggcaagaccgaagtgggaggtcgg
cgttggctctggattggtgccatcttcggcggggtctacggctttctgttcggcggtgtt
ctgtggctgctgctgtttgctggcctcggtgccctgattggaggcaaccttaaaagcatc
ttccaacgcttcaatcagggctttgaccggttggctcgggcttacgccacattggtggcg
caagccattcgctttcgccgcatcctggtgagtggcctgctaggtggggtggtgctgacg
gcactcgcctttctgacgattccaaccggctttgtgcccaccgaagatcagggctatggc
ctgggcatcattcagctgccgccgcaagcctccttggaagccacgatggaggtggccgat
caggcacgcaccatcctcgccaagcagcccgaggtagtgagtggtgagttcatcggtggc
gctggctttaatggcggctctctcaatcaggggctgttcttttttggactcaagcccatt
gacgagcgcaccaagaagagtcaatcagctcaggccatcatcaaggacctcaaccagcag
ttccagagcatcaagggaggactggtcttggctcagtcgccgccagccgtaccaggattc
agcgcgcaaggtggtctctcttttcagttcaatgatctgagcaacggtggctacagcttc
accgacctcagggagatggctgatgagctgatcgctaaagccaagagcaccggcgactat
ttcaacctctattcccagttcgtcagtgatgcgccggtctggcggcttgagcctgaccgt
gatcgcatggcatcgctaaacgtcaacttcagtgatgccatgcagggcttagaagccatt
tatggcggcagttttgtcaaccagacctacgaaggcgggcagtatcgccaggtgtatgtc
caagcggagggaagccagcgggctgtgattgaaagcctggacaacctctacgtgaactca
gtttcgggagaccagattcctgtttccgagctggtgaccgtcaagctcgatagcgcccca
ccgatcattaaccactacgacctctaccgcacggtgctgattcaaggggtcaatgcggtg
ggcaagagcagtggtcaagcgatcgacacgctgcagtcgactttcaaacagatgaatttc
gccaacatcggtatggcctggtctgctctgagccgctccgaggtggctgccggatcgctg
gcagcgctggtttttgcgctgggcttggttgtggtctatctggttctgtcggcccagtac
ggcagttacatcgatccgctggtgattctgatgaccgttcccctggcgatccttggtgct
ctgatctttctggtgcttcgcggccaagtcaacaatgtctatgcccaggtggggctggtc
accctgatcggcttggctgccaaaaacggcattctcattgtggatatggcgaatcagcgc
atggaggctgggatggatgtgatcgaagcggccagcagcgctgcgcagtcgcgtctacgc
ccgatcctgatgacagcagctgctgcactctcgggctttttcccgctggttgtggcctct
ggtgcgggggctttgagccagcgctccatcggtgctgtcatttttggcggtctgctggtg
gccacagtgctgagcctgtttgtggtcccagcgttttacgtgctgatgaaaaagctggag
gccaactggttcccggccagtcatgagcagcaggacccactcccgcaaccctga
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