Synechococcus sp. RCC307: SynRCC307_1045
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Entry
SynRCC307_1045 CDS
T00523
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SynRCC307_1045 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syr03400
]
SynRCC307_1045 (nth)
Enzymes [BR:
syr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SynRCC307_1045 (nth)
DNA repair and recombination proteins [BR:
syr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SynRCC307_1045 (nth)
Prokaryotic type
SynRCC307_1045 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF3349
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CAK27948
UniProt:
A5GST9
LinkDB
All DBs
Position
complement(946889..947542)
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AA seq
217 aa
AA seq
DB search
MKKQERVETIIRRLNEQYPETPIPLDHSDAFTLLIAVLLSAQCTDKKVNEVTPALFAAGP
NPAAMAALSEAEILGLIRQLGLAKTKAKNVKRLAELLLERHGGEVPGSFEALEALPGVGH
KTASVVMSQAFGVPAFPVDTHIHRLAQRWGLSNGDSVAQTEADLKRLFPKEHWNRLHLQI
IFWGREFCTARGCDGRVCSMCTEMYPNRRKAVIWRKP
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaagcaggaacgcgttgaaacgatcatccgccggctgaatgagcagtaccccgaa
acacccatcccgttggatcacagcgatgccttcacgctgctgatcgctgtgctgctcagc
gcccaatgcaccgacaagaaggtcaatgaggtcacgccggccctgtttgccgctggcccc
aatccagcggcgatggcggcattaagcgaagcggagatcctcggcttgatccgccaactg
ggtctggccaaaaccaaggccaagaacgtcaaacgcttggctgagttgctgctggaacgc
catgggggcgaggtgccaggcagctttgaggccctcgaagccctgcccggagtgggacac
aaaacagccagcgtggtgatgtcgcaggcctttggcgtaccggcctttcccgtggacacc
catatccaccggctggcccagcgctggggcctcagcaatggcgacagcgtggctcaaacg
gaagccgacctcaaacggctgttccccaaagagcactggaaccgcctgcatctgcagatc
attttttggggccgggagttctgcaccgcccgcggctgtgatggccgcgtctgctccatg
tgcactgagatgtatcccaaccgccgcaaagcggtgatctggcgcaaaccctga
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