Streptomyces yunnanensis: MOV08_14010
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Entry
MOV08_14010 CDS
T09344
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
syun
Streptomyces yunnanensis
Pathway
syun03030
DNA replication
syun03410
Base excision repair
syun03420
Nucleotide excision repair
syun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOV08_14010 (ligA)
03410 Base excision repair
MOV08_14010 (ligA)
03420 Nucleotide excision repair
MOV08_14010 (ligA)
03430 Mismatch repair
MOV08_14010 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syun03032
]
MOV08_14010 (ligA)
03400 DNA repair and recombination proteins [BR:
syun03400
]
MOV08_14010 (ligA)
Enzymes [BR:
syun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MOV08_14010 (ligA)
DNA replication proteins [BR:
syun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MOV08_14010 (ligA)
DNA repair and recombination proteins [BR:
syun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MOV08_14010 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MOV08_14010 (ligA)
MMR (mismatch excision repair)
DNA ligase
MOV08_14010 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MOV08_14010 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
WEB40287
UniProt:
A0ABY8A9R4
LinkDB
All DBs
Position
complement(3249540..3251756)
Genome browser
AA seq
738 aa
AA seq
DB search
MAGEQHAAASEVPAAAREKHAQLAEQIEEHRFRYYVKDAPVVSDAEFDRLLRALEALEET
HPELRTPDSPTQKVAGSYATEFTEVAHRERMLSLDNAFDDEELSAWAERIATELGGDAKG
AGYHFLCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAEIPHRLQGDRVP
ELVEIRGEVYFPMEKFLELNERLVADGKPPFANPRNAAAGSLRQKDPKVTATRPLHMVVH
GLGARDGLAIDRLSEAYDLLKEWGLPTATHNRVVDSLAAVREFIAHYGDPETRRTAVEHE
IDGVVVKLDEIRLQGRLGATSRAPRWAIAWKYPPEEVNTKLVDIRVGVGRTGRVTPYAVV
EPVTVAGSEVEFATLHNQDVVKAKGVLIGDTIVIRKAGDVIPEILGPVVDLRDGTEREFV
MPAECPECGSALQPAKEGDIDLRCPNARSCPAQIRERLFYLAGRKCLDIENFGYVAATAL
SQPLEPAEPPLTDEGGLFDLSVEELLPIKSHVLDPDTGLPKRDPKTGEEKVVTFFANQKG
EPKKNTLAMLENIQAAKERPLARILTGLSIRHVGPVAAQALAREFRSIDRIREASEEELA
AVEGVGGTIAASLKQWFAVDWHQEIIERWRAAGVRMEEEQSGETGPRPLEGVTVVVTGTL
QSHTRDGAKEALQALGAKVTGSVSKKTGFVVVGDNPGSKYDKAMQLKVPVLDDDGFAVLL
EQGPEAARAVAVTPPEEE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggctggcgaacagcacgcggcggcatccgaggtgcccgccgcggcacgggagaagcac
gcgcagctcgctgagcagatcgaggagcaccgcttccggtactacgtgaaggacgccccg
gtcgtcagcgacgcggagttcgacaggctgctgcgcgccctggaggccctggaggagacc
catcccgagctgcgcaccccggactccccgacccagaaggtcgccgggtcgtacgccacg
gagttcaccgaggtcgcgcaccgcgagcggatgctctcgttggacaacgccttcgacgac
gaggagctgtcggcctgggccgagcggatcgccaccgaactcggcggcgacgccaagggc
gccggctaccacttcctgtgcgagctgaaggtcgacggcctcgcggtcaacctcacctac
gagcacggccgcctcacccgcgccgccacccggggcgacggccgcaccggcgaggacatc
acgcccaacgtccgcaccatcgccgagatcccgcaccgcctccagggcgaccgggtcccc
gagctggtcgagatccgcggggaggtctacttcccgatggagaagttcctggagctcaac
gagcgcctggtggccgacggcaagccgccgttcgccaacccccgcaacgccgcggccggt
tcgctgcgccagaaggaccccaaggtcaccgccacccgcccgctgcacatggtggtgcac
ggcctcggcgcccgcgacggcctggcgatcgaccgcctctccgaggcgtacgacctgctc
aaggagtggggcctgcccaccgccacgcacaaccgcgtggtggactccctcgccgcggta
cgggagttcatcgcccactacggcgaccccgagacccgccgcacggccgtcgagcacgag
atcgacggcgtcgtggtcaagctcgacgagatccggctccagggccggctgggcgccacc
tcgcgggcgccgcgctgggcgatcgcctggaagtacccgccggaggaggtcaacaccaag
ctggtggacatccgcgtcggcgtcggccgcaccggacgggtcacgccgtacgcggtcgtc
gagccggtcaccgtggccggttccgaggtggagttcgccaccctgcacaaccaggacgtg
gtcaaggccaagggcgtcctgatcggcgacaccatcgtcatccgcaaggcgggcgacgtc
attccggagatcctcggcccggtcgtcgacctgcgggacggcaccgagcgggagttcgtg
atgcccgccgagtgccccgagtgcggctcggcgctccagcccgccaaggaaggcgacatc
gacctgcggtgccccaacgcccggtcctgccccgcccagatccgcgagcggctgttctac
ctcgccggccgcaagtgcctggacatcgagaacttcggctatgtcgccgccaccgccctc
agccagccgctggagcccgccgagccgccgctgacggacgagggcggcctgttcgacctc
tccgtcgaggagctgctgcccatcaagtcccatgtcctcgacccggacaccggcctgccc
aagcgcgacccgaagaccggcgaggagaaggtcgtcaccttcttcgccaaccagaagggc
gagccgaagaagaacaccctggccatgttggagaacatccaggcggccaaggagcgcccg
ctggcccggatcctcaccgggctgtcgatccgtcacgtgggcccggtggcggcgcaggcg
ctggcccgggagttccgctcgatcgaccggatcagggaggcgagcgaggaggaactggcg
gccgtggagggcgtcggcggcaccatcgccgcctccctcaagcagtggttcgccgtggac
tggcaccaggagatcatcgagcgctggcgggccgcgggcgtccgtatggaggaggagcag
tcgggtgaaacgggcccgcgtcccctggaaggcgtcaccgtcgtggtaacgggcacactt
cagtcacacaccagagatggcgcgaaagaagcgctacaggctcttggtgcgaaggtgacc
ggatccgtttccaagaagaccggattcgtagtggtgggcgacaaccccggttcgaagtac
gacaaagccatgcagttgaaggtccccgtgttggacgacgacggcttcgctgtgctgctg
gagcagggtcccgaggcggcacgagcggtagctgtcactccgcctgaggaggagtga
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