Shinella zoogloeoides: K8M09_10280
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Entry
K8M09_10280 CDS
T07727
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
szo
Shinella zoogloeoides
Pathway
szo01501
beta-Lactam resistance
szo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K8M09_10280
01503 Cationic antimicrobial peptide (CAMP) resistance
K8M09_10280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
szo02000
]
K8M09_10280
01504 Antimicrobial resistance genes [BR:
szo01504
]
K8M09_10280
Transporters [BR:
szo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K8M09_10280
Antimicrobial resistance genes [BR:
szo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K8M09_10280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UEX80019
LinkDB
All DBs
Position
complement(2048853..2051987)
Genome browser
AA seq
1044 aa
AA seq
DB search
MPSFFIDRPIFAWVVAIFIMIAGAISIPLLPIAQYPDVAPPQISVSTSYAGASSQDTYQS
VTKLIEDELNGVEGMLYFESTSSASGSAEINITFAPGTDPSQASVDVQNRISRVEPRLPD
SVRRQGVQVEEAGSGFLLIVSLTSTDGSMDAIGLGDYLNRNILSEIQRVPGVGRAQLFAT
QRSMRVWLDPAKMLGLNLTAADVTAAVQAQNAQIAAGSIGAQPNPITQQIAAPVNIKGQL
TTPEEFGAIVLRANADGSAVRLRDVARVEVGGETYSFSTRLNGQPSAAIGVQLSPSGNAM
ETSAAIKARMDELAQFFPPGLEYSIPYDTSPFVKVSIEKVLHTLLEAVGLVFLVMFLFLQ
NIRYTIIPTLVVPVALLGTCAVMYAMGFSINVLTMFAMVLAIGILVDDAIIVVENVERIM
SEEGLPPKEATRKAMKQITGAVIGITLVLASVFIPMAFFPGAVGVIYQQFSLTMVVSILF
SAFLALSLTPALAGSFLKQVPKGHHHAKRGFFGWFNRGFDKTSRAYSGSVGWLIRRTGRV
MVIYLAILVGLGYMFVKLPTSFLPDEDQGFVIVMMQLPSEATGHRTDEVLTQTEKIFGQE
SAVNTIVGINGFSFFGAGQNAGLAFVTLKDWSERGPENSAQAIAGRASMAMSQIRDAISF
ALSPPPIQGLGTTGGFSFRLQDRGGLGQQALTAATGQLIGLAAQSNVVTGVRVDGMPDAA
QVNVVIDREKANTFGVSFADINSTISTNLGSTYVNDFPNSGRMQRVTVQADQGERMQVAD
LLNLNVRNAKGGMVPISAFATAEWVKAPTQTVGYNGYPSMRISGDTKPGFSTGDAIAEME
RLAAQLPPGFGYEWTGQSLQEIQSGSQAPILITLSILLVFLCLAALYESWSIPFAVILVV
PLGVIGAVVAVTLRDMSNDVYFKVGLIAIIGLSAKNAILIIEFAKELMAEGRSLLDATVE
ACHLRFRPILMTSLAFTLGVLPLAIATGASSGSQRAIGTGVMGGMITATVLAIFFVPVFF
VFVMKLVGHGKKKEEPVPAASPAE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtttcttcatcgacaggccgattttcgcctgggtcgtggcgatcttcatcatg
atcgccggcgccatctccattccgctgctgccgatcgcgcagtatccggacgtcgccccg
ccgcagatctcggtctcgacgtcctatgccggcgcgtcctcgcaggacacctaccagagc
gtcaccaagctcatcgaggatgagctgaacggcgtcgaaggcatgctctatttcgaatcg
acctcgagcgcctcgggttcggccgaaatcaacatcaccttcgcgccgggcaccgatccg
agccaggcttcggtcgacgtgcagaaccgcatcagccgcgtcgagccgcgccttcccgat
tccgttcgccgtcagggcgtgcaggtcgaggaggccggctccggcttcctgctgatcgtc
tcgctgacctccaccgacggctccatggacgccatcggcctcggcgactatctcaaccgc
aacatcctgtcggaaatccagcgcgtgcccggcgtcggccgcgcgcagctcttcgccacg
cagcgctccatgcgcgtctggctcgatccggccaagatgctcggcctgaacctcaccgca
gccgacgtgaccgccgccgtgcaggcgcagaacgcgcagatcgcggccggcagcatcggc
gcccagccgaacccgatcacccagcagatcgcggctccggtgaacatcaagggccagctc
acgacgccggaagagttcggcgccatcgttctgcgcgccaatgcggatggttccgccgtg
cgcctgcgcgacgtcgcgcgcgtcgaggtcggcggcgagacctattccttctcgacccgc
ctcaacggccagccgtccgccgccatcggcgtgcagctttcgccgtccggcaacgccatg
gagacctccgcggcgatcaaggcgcgcatggacgaactggcgcagttcttcccgccgggc
ctggaatactcgatcccctacgacacctcgcccttcgtgaaggtgtccatcgagaaggtg
ctgcacacgcttctcgaagccgtgggcctcgtgttcctcgtgatgttcctgttcctgcag
aacatccgctacacgatcatcccgacgctcgtcgtgcccgtcgcgctgctcggcacctgc
gccgtcatgtatgccatgggcttttcgatcaacgtgctcaccatgttcgccatggtgctc
gccatcggcattctcgtggacgatgcgatcatcgtcgtggagaatgtcgagcgcatcatg
tcggaagaggggctgccgccgaaggaggcgacccgcaaggcgatgaagcagatcaccggc
gccgtcatcggcatcacgctggtgctcgcctcggtgttcattccgatggccttcttcccc
ggcgcggtgggcgtcatctaccagcagttctcgctgacgatggtcgtctcgatcctgttc
tcggccttccttgccctgtcgctgaccccggcgctcgccggcagcttcctgaagcaggtg
ccgaaggggcatcaccacgccaagcgcggtttcttcggctggttcaaccgtggcttcgac
aagacgtcgcgggcctatagcggcagcgtcggctggcttatccgccgcaccggccgcgtg
atggtgatctacctcgcgatccttgtgggcctcggctacatgttcgtgaagctgccgacc
tcgttccttccggacgaggaccagggcttcgtgatcgtcatgatgcagcttccctcggaa
gcgaccggccaccgcacggacgaggttctcacgcagaccgagaagatcttcggccaggaa
tccgccgtcaacaccatcgtcggcatcaacggcttctcgttcttcggcgcgggccagaat
gcgggccttgccttcgtgacgctgaaggactggagcgagcgcgggccggaaaattccgcg
caggcgattgccgggcgcgccagcatggcgatgagccagatcagggatgcgatcagcttc
gcgctgtcgccgccgccgatccagggcctgggcacgacgggcggcttctcgttccgtctc
caggaccgcggcgggctgggccagcaggcgctgacggccgcgacgggccagctcatcggc
cttgccgcccagagcaatgtcgtcacgggcgtgcgcgtcgacggcatgccggacgccgcg
caggtcaatgtcgtgatcgaccgcgagaaggccaacaccttcggcgttagcttcgccgac
atcaactcgacgatctcgaccaatctcggctcgacctatgtcaacgacttcccgaactcc
gggcgcatgcagcgcgtgacggttcaggcggatcagggcgagcgcatgcaggtcgccgac
ctcctcaacctcaacgtccgtaacgccaagggcggcatggtgccgatctcggccttcgcg
acggcggagtgggtgaaggcgccaacgcagaccgtgggctataacggttatccgtccatg
cgcatcagcggcgacaccaagccgggcttctccacgggcgatgcgatcgccgagatggag
cggctcgccgcccagcttccgccgggcttcggctatgagtggacgggccagtcgctgcag
gaaatccagtccggctcgcaggccccgatcctgatcaccctgtcgatcctcctggtgttc
ctgtgccttgcggcgctctacgagagctggtccattcccttcgcggtcatcctcgtggtg
ccgctcggggtgatcggcgcggtcgtggccgtgacgctgcgcgacatgtcgaacgacgtg
tacttcaaggtgggcctcatcgcgatcatcggcctttcggcgaagaacgcgatcctgatc
atcgagttcgccaaggagctgatggcggaaggccggtcgctgctcgacgccaccgtcgag
gcctgccacctgcgcttccgcccgatcctgatgacctcgctcgccttcacgctcggcgtt
ctgccgctcgccatcgccacgggcgcaagctcgggcagccagcgcgccatcggcaccggc
gtgatgggcggcatgatcaccgccaccgtgctcgccatcttcttcgtgcccgtcttcttc
gtcttcgtgatgaagctcgtcggccacgggaagaagaaggaggagccggttccggccgca
agcccggcagagtaa
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