Shinella zoogloeoides: K8M09_10425
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Entry
K8M09_10425 CDS
T07727
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00540
Lipopolysaccharide biosynthesis
szo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
K8M09_10425 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
szo01005
]
K8M09_10425 (lpxC)
Enzymes [BR:
szo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
K8M09_10425 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
szo01005
]
Lipid A
K8M09_10425 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
UEX80047
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All DBs
Position
complement(2082240..2083196)
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AA seq
318 aa
AA seq
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MHMTMLGFQTTISHPVTISGTGVHSGAAVSITFNPSEADSGIVFQRQHDDGTVSEYRAVS
SQVGNTDLCTVLGFSPATCIATIEHVMAALYALGLDNVLIEVHGAEMPIMDGSSAPFIDA
IDQVGLVALSVKRRYIRIVKPVRIEAGASWAEFSPYDGTRFEVEIDFDCPLIGRQAWKGD
LTPATFRNELSRARTFGFMRDVERLWASGHALGSSLENSVVISDDNTVINVEGLRYAKDE
FVRHKTLDAVGDLALAGAPFIGCYRSYRGGHKMNAHALNALLSDRTAYEVVEASTPRSRA
GQRELIAVNAPEFAPWSL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgacgatgctcggtttccagacgacgatctcccatccggtgacgatttccggt
acgggcgtccattccggtgcggcggtttcgatcaccttcaacccctccgaggccgacagc
ggcatcgtcttccagcgccagcatgacgacggcaccgtcagcgaataccgcgccgtctcc
tcgcaggtcggcaatacggatctgtgcaccgttctcggcttctcgccggcaacctgcatc
gccaccatcgagcatgtcatggctgcgctctatgcgctcggcctcgacaatgtgctgatc
gaagtccacggcgccgaaatgccgatcatggacggcagctccgcccccttcatcgacgcc
atcgatcaggtcggcctcgtcgccctttccgtcaagcgccgctatatccgcatcgtcaag
ccggtgcgcatcgaggcgggcgcgtcctgggccgagttctcgccctatgacggcacgcga
ttcgaggtcgagatcgatttcgactgcccgctgattggccgccaggcctggaagggcgat
ctgacgcctgccaccttccgcaacgaactgtcccgcgcgcgcaccttcggcttcatgcgc
gatgtcgagcgtctctgggcctccggccatgcgctcggctcctcgctggaaaactccgtc
gtcatctccgatgacaatacggtgatcaacgtggaaggcctgcgctacgcgaaggacgag
ttcgttcgtcacaagaccctcgacgccgtgggcgaccttgcccttgccggcgcacccttc
atcggctgctaccgctcctatcgcggcggccacaagatgaacgcccatgcgctgaacgcc
cttctcagcgaccgcaccgcctatgaggtggtcgaggcttccacgccgcggtcccgcgcc
ggccagcgcgagctgatcgccgtcaacgctcccgagttcgcgccctggtctctgtga
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