Shinella zoogloeoides: K8M09_10490
Help
Entry
K8M09_10490 CDS
T07727
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00300
Lysine biosynthesis
szo00550
Peptidoglycan biosynthesis
szo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K8M09_10490
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K8M09_10490
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
szo01011
]
K8M09_10490
Enzymes [BR:
szo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
K8M09_10490
Peptidoglycan biosynthesis and degradation proteins [BR:
szo01011
]
Precursor biosynthesis
Amino acid ligase
K8M09_10490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
UEX80060
LinkDB
All DBs
Position
complement(2098409..2099860)
Genome browser
AA seq
483 aa
AA seq
DB search
MKISDLAGPQTNALGAAAAIDATGIASDSRKVKPGDLFVALSGTKADGSAFIADAVSRGA
AAVVVAEGVKVETSAPVIAVAEPRRFLALAAAHFYGRQPETMVAVTGTAGKTSVASFTRQ
IWEHAGHAAAMIGTTGVVAPGRNDYGSLTTPDPVSLHALLAELADAGVTHAAMEASSHGL
DQSRLDGVKLSAAAFTNLGRDHMDYHPTVEHYMASKMRLFDTLLEKGAPAVIYADDEWSG
VAIDAARKAGLDVRTVGRKGDYLTLKRVEHFRHKQTAEIHVGGEIFEVHIPLAGDFQVAN
ALVAAGLAMSTGVPAAIAMAALEKLIGASGRLELVGHAKNGALAYVDYAHKPDALENVLT
SVRPFTTGRVIVVFGCGGDRDKGKRPIMGEIATRLADVVIVTDDNPRSEVPAVIRSEIMA
AAKGATEIGDRAEAIRGAVGMLQSGDTLIVAGKGHEEGQTVGTVTLPFSDHAELRKALEE
LDR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcagtgacctcgccggacctcaaaccaatgccctgggcgcagccgccgcgata
gacgcgaccggcattgccagcgacagccgcaaggtgaagcccggcgatctcttcgtcgct
ctttccggcaccaaggccgatggcagcgccttcatcgccgatgccgtctcccgtggcgcc
gccgctgtcgtcgttgccgagggcgtgaaggtcgagacctccgcgccggtcatcgctgtc
gccgagccgcgccgcttcctggcgcttgccgccgcgcatttctacggtcgccagccggaa
accatggtggccgtcaccggcaccgccggcaagacgtccgtcgcctccttcacccgccag
atatgggaacatgccggccacgcggccgcgatgatcggcacgaccggcgtcgtggccccc
ggccgcaacgattacggttcgctgacgacgcccgatccggtgtcgctgcatgcgctgctg
gccgagcttgccgatgccggcgtcacccatgccgccatggaggcctccagccacggcctc
gaccagtcgcgcctcgacggcgtgaagctttccgccgccgccttcaccaatcttggccgc
gaccacatggattaccatccgacggtcgagcactacatggcctccaagatgcggctcttc
gatacgctgctggaaaagggcgcccccgccgtcatctatgccgatgacgaatggtcgggc
gtggcgatcgacgcggcgcgcaaggccggtctcgacgtgcgcacggtcggtcgcaagggc
gactatcttacgctgaagcgcgtcgagcatttccgccacaagcagaccgccgaaatccat
gtcggcggcgagattttcgaagttcacattccgctggccggcgatttccaggtggccaat
gcgctggtcgcggccggtcttgccatgtcgacgggcgttcccgccgccattgccatggcc
gcgctggaaaagctgatcggcgcgtccggccgcctcgaactggtgggccatgcgaagaac
ggtgcgctcgcctatgtcgactatgcgcacaagccggatgcgctggaaaacgtgctgacc
tccgttcgtcccttcacgacgggccgcgtcatcgtggtcttcggctgcggcggcgaccgc
gacaagggcaagcggccgatcatgggcgagatcgccacgcggcttgccgatgtggtgatc
gtcaccgacgacaatccgcgctcggaagtgcccgctgtcatccgctcggaaatcatggcc
gccgccaaaggcgcgaccgagatcggcgaccgtgccgaggcgatccgcggggctgtcggc
atgctgcaatcgggcgatacgctgatcgtcgccggcaaggggcatgaagaggggcagacg
gtcggcaccgtcacgctgccgttctccgaccatgcggagctgcgcaaggcactggaggag
ttggaccgttga
DBGET
integrated database retrieval system
