Shinella zoogloeoides: K8M09_15880
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Entry
K8M09_15880 CDS
T07727
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00020
Citrate cycle (TCA cycle)
szo00270
Cysteine and methionine metabolism
szo00620
Pyruvate metabolism
szo00630
Glyoxylate and dicarboxylate metabolism
szo00680
Methane metabolism
szo00710
Carbon fixation by Calvin cycle
szo00720
Other carbon fixation pathways
szo01100
Metabolic pathways
szo01110
Biosynthesis of secondary metabolites
szo01120
Microbial metabolism in diverse environments
szo01200
Carbon metabolism
Module
szo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
szo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
szo_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
K8M09_15880 (mdh)
00620 Pyruvate metabolism
K8M09_15880 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
K8M09_15880 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
K8M09_15880 (mdh)
00720 Other carbon fixation pathways
K8M09_15880 (mdh)
00680 Methane metabolism
K8M09_15880 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
K8M09_15880 (mdh)
Enzymes [BR:
szo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
K8M09_15880 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
Motif
Other DBs
NCBI-ProteinID:
UEX81040
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Position
complement(3221409..3222371)
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AA seq
320 aa
AA seq
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MARKKIALIGSGMIGGTLAHLAGLKELGDIVLFDIADGIPQGKGLDIAQSSPVEGFNASL
TGASDYAAIEGADVCIVTAGVARKPGMSRDDLLGINLKVMEQVGAGIKKYAPNAFVICIT
NPLDAMVWALQKFSGLPKNMVVGMAGVLDSARFRLFLSEEFKVSVQDVTAFVLGGHGDTM
VPLARYSTVAGIPLTDLVKMGWVTKERLEEIIQRTRDGGAEIVGLLKTGSAYYAPAASAI
EMAESFLKDKKRVLPVAAHLSGQYGVKDMYVGVPTVIGAGGVERIVEIDLNKAEQEAFDK
SVAAVAGLCEACINIAPALK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaagaagatcgcacttattggttctggcatgatcggtggcacgctggcgcat
ctggccggcctgaaggagctgggcgacatcgtcctcttcgacatcgccgacggtattccg
cagggcaagggcctcgatatcgcccagtcctcgccggtcgaaggcttcaatgcctcgctg
acgggcgcgagcgactatgccgccatcgaaggcgcggacgtctgcatcgtcaccgccggc
gttgcccgcaagcccggcatgagccgcgacgatcttctcggcatcaacctcaaggtcatg
gaacaggtcggcgcaggcatcaagaaatatgccccgaacgccttcgtcatctgcatcacc
aacccgctcgacgcgatggtctgggcgctgcagaagttctccggcctgccgaagaacatg
gtcgtcggcatggccggcgtgctggactcggcccgcttccgcctcttcctctccgaagaa
ttcaaggtttccgtccaggacgtcacggccttcgttctcggcggccacggcgacacgatg
gtgccgctcgcccgctactcgaccgttgccggcatcccgctgaccgacctcgtcaagatg
ggctgggtcaccaaggaacgcctcgaagaaatcatccagcgcacccgtgacggcggcgcc
gagatcgtcggcctcttgaagaccggctcggcctactatgctccggccgcttccgccatc
gagatggccgaatccttcctcaaggacaagaagcgcgtcctgccggtcgctgcccacctt
tcgggccagtacggcgtcaaggacatgtatgtcggcgttccgaccgtcatcggcgccggt
ggcgtcgagcgcatcgtcgagatcgacctcaacaaggccgagcaggaagccttcgacaag
tcggtcgctgccgttgccggcctctgcgaagcctgcatcaacatcgcgcccgccctgaag
taa
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